BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2094.p
         (175 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980445|ref|YP_001353236.1| intracellular septation protein...   244   2e-66

>gi|152980445|ref|YP_001353236.1| intracellular septation protein A
           [Janthinobacterium sp. Marseille]
          Length = 206

 Score =  244 bits (624), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 116/174 (66%), Positives = 144/174 (82%)

Query: 2   HYLGGAMSAGAVTATQAPILLSTAVAIIASLGQIAWLLLRRRKVDAMLWVSLAIIVVFGG 61
            YL G +S G VTA+QAPILL+TAVAIIA++ QI +LL++ RK+D  LW+SL IIVVFGG
Sbjct: 33  QYLSGVVSDGLVTASQAPILLATAVAIIATVLQIGYLLVKGRKIDKTLWLSLGIIVVFGG 92

Query: 62  ATIYFRDDTFIKWKPTILYWCFGVALLGSQWFMKKNLIRVMMEKQVTLPEPIWPRLNLAW 121
           ATIYF ++TFIKWKPT+LYWCF  ALL SQ F+KKNLIR MMEKQ++LP+ IW RLNL+W
Sbjct: 93  ATIYFHNETFIKWKPTVLYWCFAAALLFSQIFLKKNLIRTMMEKQMSLPDGIWHRLNLSW 152

Query: 122 IVFFAVMGVLNLYIAFNYPLDTWVNFKMFGSMGLMFAFIIGQSLFLSKYMKDEQ 175
           + FF  MG++NLY+A+++   TWVNFK+FG MGLM AFI+ QSL LSKYMK+ Q
Sbjct: 153 VGFFLTMGLINLYVAYSFSTATWVNFKLFGGMGLMVAFIVAQSLLLSKYMKEPQ 206


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.331    0.142    0.463 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 420,267
Number of extensions: 16847
Number of successful extensions: 75
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 75
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 1,221,021
Length adjustment: 77
Effective length of query: 98
Effective length of database: 936,352
Effective search space: 91762496
Effective search space used: 91762496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 126 (53.1 bits)