BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2090.p (1340 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980745|ref|YP_001353233.1| phosphoribosylformylglycinamidi... 2298 0.0 >gi|152980745|ref|YP_001353233.1| phosphoribosylformylglycinamidine synthase [Janthinobacterium sp. Marseille] Length = 1334 Score = 2298 bits (5956), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1098/1341 (81%), Positives = 1199/1341 (89%), Gaps = 8/1341 (0%) Query: 1 MLILPGSNALSAFRTQRLLTQLQAVDAAITGVSGRYLHFVDAKA-LTQEDEARLNGLLTY 59 MLILPGSNALSAFRT+RLLTQLQ VD AI GV+GR+LHFVD+ A L D RL+ LLTY Sbjct: 1 MLILPGSNALSAFRTERLLTQLQQVDHAIVGVTGRFLHFVDSAAPLADVDVRRLDALLTY 60 Query: 60 GDPFNGSDEGDAFVVIPRFGTISPWASKATDIVRNCGMGHIHRVERGIIFRVQVKTGLLG 119 G+PF+ EGD FVVIPRFGTISPWASKATDI NCGM I R+ERGI++ V VK+GLLG Sbjct: 61 GEPFSAKLEGDEFVVIPRFGTISPWASKATDIAHNCGMAGIRRIERGIVYVVHVKSGLLG 120 Query: 120 GTKKLNEASLPAVAALLHDRMTETVLREPQDAAALFSELQAKPLESVDVIGGGRAALERA 179 G + L+E S AV ALLHDRMTE VLR +AA LF EL+AKPL +D++ GG+AAL A Sbjct: 121 GARHLSEESTVAVQALLHDRMTEMVLRSADEAAGLFGELEAKPLAFIDLLQGGKAALVNA 180 Query: 180 NTELGLALSDDEIDYLVEAFTKAQRNPTDVELMMFAQANSEHCRHKIFNADWTIDGEKQD 239 NTELGLALSDDEIDYL+ AFT A+RNPTDVELMMFAQANSEHCRHKIFNADWTIDG KQD Sbjct: 181 NTELGLALSDDEIDYLLAAFTTAKRNPTDVELMMFAQANSEHCRHKIFNADWTIDGVKQD 240 Query: 240 KSLFGMIKNTHQLAPKGTVVAYSDNSSIIEGATVSRFYQRGATKGNVYEASDELTHILMK 299 KSLF MIKNTHQLAP+GTVVAYSDNSS+IEGATV+RFY RGA GNVYEAS+ELTHILMK Sbjct: 241 KSLFAMIKNTHQLAPRGTVVAYSDNSSVIEGATVTRFYPRGAAAGNVYEASEELTHILMK 300 Query: 300 VETHNHPTAISPFPGASTGAGGEIRDEGATGRGSKPKAGLTGFTVSNLMVTHAVQPWENA 359 VETHNHPTAISPFPGASTGAGGEIRDEGATGRG+KPKAGL+GFTVSNLM+ VQ WEN+ Sbjct: 301 VETHNHPTAISPFPGASTGAGGEIRDEGATGRGAKPKAGLSGFTVSNLMLPDGVQAWENS 360 Query: 360 RDVAQPVAERAEHAQGGIYGKPERIASPLQIMIDGPLGGAAFNNEFGRPNLGGYFRTYEQ 419 DV +PV++ A +YGKP+RIASPL+IM+DGP+G AAFNNEFGRPNLGGYFRTYEQ Sbjct: 361 HDVTKPVSDTAP-----VYGKPDRIASPLEIMVDGPIGAAAFNNEFGRPNLGGYFRTYEQ 415 Query: 420 NVGGQVMGYHKPIMIAGGMGNISAKHTKKNDLPVGSLLIQLGGPGMRIGMGGGAASSMAT 479 N+ G V GYHKPIMIAGG+G+ISAKHTKK+DLPVGSLLIQLGGPGMRIGMGG AASSMAT Sbjct: 416 NIAGSVNGYHKPIMIAGGIGSISAKHTKKHDLPVGSLLIQLGGPGMRIGMGGSAASSMAT 475 Query: 480 GVNTADLDFDSVQRGNPEMERRAQEVINACWALGDENPIQSIHDVGAGGLSNAFPEITND 539 G NTADLDFDSVQRGNPEMERRAQEVINACWA+ D+NPI SIHDVGAGGLSNAFPEITND Sbjct: 476 GTNTADLDFDSVQRGNPEMERRAQEVINACWAMQDDNPILSIHDVGAGGLSNAFPEITND 535 Query: 540 AKRGAIFDLRKVPLEESGLAPREIWSNESQERYVLAILPEHLPLFKYLCERERAPFAVVG 599 AKRGAIFDLRKVPLEESG+AP+EIWSNESQERYVLAI PE LP F YLCERER FAVVG Sbjct: 536 AKRGAIFDLRKVPLEESGMAPKEIWSNESQERYVLAIAPESLPQFTYLCERERCLFAVVG 595 Query: 600 TATEERQLKVIDPEHNNSPVDMPMDVLLGKPPKMHRDVQHVEKQLPPVDLTGMDLVEVAQ 659 TATEERQLKVIDPEH N PVDMPMDVLLGKPPKMHRDV HV++ LP +D+TG+DL+E + Sbjct: 596 TATEERQLKVIDPEHGNDPVDMPMDVLLGKPPKMHRDVTHVQQDLPAIDVTGIDLLEASV 655 Query: 660 RVLRLPAVADKSFLITIGDRSVGAMTVRDQMVGPWQVPVADVAVTAMGLEGYLGEAMAMG 719 RVLRLP VADKSFLITIGDRSVG TVRDQMVGPWQVPVAD AVT M EGYLGEAMAMG Sbjct: 656 RVLRLPTVADKSFLITIGDRSVGGTTVRDQMVGPWQVPVADCAVTTMSFEGYLGEAMAMG 715 Query: 720 ERTPLAVIDAPASGRMAVGEAITNIAAAPIAEIGDIKLSANWMAACGQPGQDAALFDTVK 779 ERTPLAVI+A ASGRMAVGEA+TNIAAAPIA+I DIKLSANWMAACGQPGQDAALFDTVK Sbjct: 716 ERTPLAVINAAASGRMAVGEALTNIAAAPIADISDIKLSANWMAACGQPGQDAALFDTVK 775 Query: 780 AVGMELCPALGISIPVGKDSLSMRSTWSDEEGAKSVTSPVSLIVSGFAPVTDVRRVLTPQ 839 AVGMELCPALGISIPVGKDSLSMR+TW DE K+V SPVSLIVS F+PV DVR+ LTPQ Sbjct: 776 AVGMELCPALGISIPVGKDSLSMRTTWKDEGADKAVVSPVSLIVSAFSPVYDVRKSLTPQ 835 Query: 840 LRKDKGETVLILIDLGRGKNRMGASALTQVMQQIGNETPDVDSAEDLKAFFNAIQQLNTE 899 LR D G+TVLI+IDLGRGKNR+GASA QVMQQIGNETPDVDSAEDLK FFNAIQ+LN E Sbjct: 836 LRTDAGDTVLIVIDLGRGKNRLGASAFAQVMQQIGNETPDVDSAEDLKGFFNAIQRLNKE 895 Query: 900 DRLLAYHDRSDGGLYATLAEMAFAGHTGISVNLDILTMEAEHAADWGDSKNWTTQVAERR 959 D+LLAYHDRSDGGL+ TL EMAF+GH+G+SVNLDILT+E EHA+D GD+KNWTTQVAERR Sbjct: 896 DKLLAYHDRSDGGLFTTLCEMAFSGHSGLSVNLDILTLEGEHASDGGDAKNWTTQVAERR 955 Query: 960 NELTLRALFSEELGAVIQVPAEQKSEVMNVLRTYNLGACSHIIGKPNDRDVIEFMRDAKN 1019 N+LTLRALF+EELGAVIQV AEQKSEVMNVLR YNLGACSHIIGKPN+ D+IEF RDAK Sbjct: 956 NDLTLRALFNEELGAVIQVRAEQKSEVMNVLREYNLGACSHIIGKPNETDMIEFTRDAKA 1015 Query: 1020 IYGQPRAELHRVWSETSWRIARLRDNPACADAEYERLLDAADPGMTPKLTFDPQEDIAAP 1079 IY Q R +LHR WSETSWRIARLRDNP CADAEY+R+LD DPG++PKLTF+PQEDIAAP Sbjct: 1016 IYSQSRIDLHRFWSETSWRIARLRDNPDCADAEYDRILDKLDPGISPKLTFEPQEDIAAP 1075 Query: 1080 YLSLGAAARPKVAILREQGVNSHIETAYAMHKAGFTAVDVHMSDLIANRAKLDDFKGFIA 1139 +++ G ARP VAILREQGVNSHIETAY MHK+GFTAVDVHMSDLI+ RA L DFKG IA Sbjct: 1076 FIATG--ARPHVAILREQGVNSHIETAYVMHKSGFTAVDVHMSDLISGRAHLSDFKGVIA 1133 Query: 1140 VGGFSYGDVLGAGEGWAKTILFNAALAEQFSRFFQRQDTFSLGICNGCQMMSNLKSMIPG 1199 VGGFSYGDVLGAGEGWAKTILFN LAEQF+ FF RQDTF+LGICNGCQMMSNLKS+IPG Sbjct: 1134 VGGFSYGDVLGAGEGWAKTILFNNQLAEQFATFFSRQDTFALGICNGCQMMSNLKSIIPG 1193 Query: 1200 AQAWPKFTRNKSEQFEARFVMVEVADSPSIFMQGMAGTQAPIATAHGEGFADFSQTGDID 1259 AQAWPKFTRNK+EQF+ARF MVEVADSPSIF GMAGTQ+ IA AHGEG+ADFS TGDI+ Sbjct: 1194 AQAWPKFTRNKAEQFQARFSMVEVADSPSIFFNGMAGTQSAIAIAHGEGYADFSLTGDIN 1253 Query: 1260 RAIIAMRYVDHRGAATEAYPFNPNGSPQGITSVTTPDGRFTVLMPHAERVFRTVTQSWHP 1319 A++AMR+VD++G ATE YP+NPNGSPQGITSVTTPDGRFTVLMPHAERVFR+V QSWHP Sbjct: 1254 EALVAMRFVDNKGRATENYPYNPNGSPQGITSVTTPDGRFTVLMPHAERVFRSVQQSWHP 1313 Query: 1320 ESWGEDSPWMRMFRNARKWVG 1340 ESWGEDSPWMRMFRNARKWVG Sbjct: 1314 ESWGEDSPWMRMFRNARKWVG 1334 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.318 0.134 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 3,272,569 Number of extensions: 147221 Number of successful extensions: 383 Number of sequences better than 1.0e-08: 1 Number of HSP's gapped: 378 Number of HSP's successfully gapped: 1 Length of query: 1340 Length of database: 1,221,021 Length adjustment: 95 Effective length of query: 1245 Effective length of database: 869,806 Effective search space: 1082908470 Effective search space used: 1082908470 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)