BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2085.p
         (232 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980543|ref|YP_001353227.1| acyl-CoA thioesterase I precurs...   233   7e-63

>gi|152980543|ref|YP_001353227.1| acyl-CoA thioesterase I precursor
           [Janthinobacterium sp. Marseille]
          Length = 219

 Score =  233 bits (594), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 119/211 (56%), Positives = 152/211 (72%)

Query: 20  SARTALGNGLLRLLLGLALMLAATSAYSAPKNLLVLGDSLSAEYGLQRGSGWTTLLQQRL 79
           S +  +   +LR    L L     +AYSA K ++VLGDSLSAEYGL RG GW +LLQ++L
Sbjct: 8   SYQVEIAKRVLRTAALLMLTAFTMNAYSASKTIVVLGDSLSAEYGLARGEGWVSLLQKKL 67

Query: 80  QQDKSGFQVVNASISGDTTIGGRNRLPALMTQHKPAVLVIELGANDALRGLPLKTSQDNL 139
           + +K    +VNASISG+TT GG  RL AL+ +H+PAV+VIELGANDALRGL L  +Q NL
Sbjct: 68  EAEKISAPIVNASISGETTSGGAARLQALLDKHQPAVVVIELGANDALRGLSLIATQQNL 127

Query: 140 QAMIDLARAQKAKVLLVGMQIPPNYGPDYTRRFAAMYQDLAKANKLALVPFFFEGIAADL 199
           + M+  ++  KAKVLLVGMQIPPNYG DYTR+FA +Y  +AK  K ALVPF  + +A   
Sbjct: 128 RTMVAASKKAKAKVLLVGMQIPPNYGTDYTRQFAELYPKIAKETKSALVPFMLKDVADKA 187

Query: 200 SQFQADRIHPNEQAQPRLLDNVWPYLKPLLG 230
           + FQADRIHP+ +A P +L+N+WP LKPLL 
Sbjct: 188 NLFQADRIHPSAEAHPVILNNIWPQLKPLLA 218


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.135    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 497,378
Number of extensions: 18010
Number of successful extensions: 60
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 60
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 1,221,021
Length adjustment: 80
Effective length of query: 152
Effective length of database: 925,261
Effective search space: 140639672
Effective search space used: 140639672
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)