BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2069.p
         (301 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980155|ref|YP_001353689.1| nicotinate-nucleotide pyrophosp...   423   e-120

>gi|152980155|ref|YP_001353689.1| nicotinate-nucleotide
           pyrophosphorylase [Janthinobacterium sp. Marseille]
          Length = 290

 Score =  423 bits (1088), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/286 (76%), Positives = 250/286 (87%)

Query: 15  SNLRNPFGPFDAALHAAFDANVNQAIAEDVGDCDYTGLLVPENEFVKARVIVREVAVLCG 74
           S LRNPF PFDAAL AAF+ N+  A+AEDVG  D TG LVPE E V+ARVIVRE AVLCG
Sbjct: 2   SLLRNPFAPFDAALAAAFERNIETALAEDVGTGDVTGKLVPEQEVVQARVIVREAAVLCG 61

Query: 75  APWFEAVMTRLDPRLQVSWAYAEGDLMAADSQVCSIEGPARALLTAERGALNFLQLLSGV 134
           APWFE VM RLD R++++W YAEGD+M ADS+VC+IE PARALLTAER ALNFLQLLSGV
Sbjct: 62  APWFECVMKRLDARIKITWHYAEGDVMTADSEVCAIEAPARALLTAERSALNFLQLLSGV 121

Query: 135 ATATRRYVEVVQGTGAAILDTRKTLPGLRLAQKYAVRVGGGANQRLALYDGILIKENHIA 194
           A+ATR Y  +V GT AAILDTRKTLPGLRLAQKYAVRVGGG NQRLALYDGILIKENHIA
Sbjct: 122 ASATREYTGIVSGTKAAILDTRKTLPGLRLAQKYAVRVGGGKNQRLALYDGILIKENHIA 181

Query: 195 AAGGITAAVAAALKLNAGVSIQVEVESIAELDEALQAGAQSILLDNFSLEMMRQAVALNA 254
           AAGG+ AA+ AAL L AGV+IQ+EVE++AEL +AL AGA+S+LLDNFSL  MR+AVAL A
Sbjct: 182 AAGGVRAAMEAALALKAGVTIQIEVENLAELKDALDAGAESVLLDNFSLADMREAVALTA 241

Query: 255 GRALLEASGGINMQTVRAIAETGVDRISIGSLTKDIQATDFSLRVI 300
           GRALLEASGGIN +T+RAIAETGVDRISIG+LTKDI+ATD+SLR++
Sbjct: 242 GRALLEASGGINRETLRAIAETGVDRISIGALTKDIRATDYSLRIV 287


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.132    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 605,114
Number of extensions: 22755
Number of successful extensions: 99
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 99
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 218
Effective length of database: 914,170
Effective search space: 199289060
Effective search space used: 199289060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 129 (54.3 bits)