BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2067.p (532 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980982|ref|YP_001353691.1| ABC transporter ATPase [Janthin... 940 0.0 gi|152981021|ref|YP_001353764.1| ABC transporter ATPase [Janthin... 303 2e-83 gi|152980787|ref|YP_001354212.1| ATP-binding ABC transporter pro... 243 2e-65 gi|152981164|ref|YP_001355224.1| putative ABC transporter ATP-bi... 234 1e-62 gi|152981020|ref|YP_001352897.1| ABC-type uncharacterized transp... 100 4e-22 >gi|152980982|ref|YP_001353691.1| ABC transporter ATPase [Janthinobacterium sp. Marseille] Length = 508 Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/507 (88%), Positives = 478/507 (94%), Gaps = 1/507 (0%) Query: 27 GNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDVNERLGKLRQDQFAYEEMRVLDVVM 86 GNRYGLIGANGCGKSTFMKILGGDL+PSAG V LD NERLGKLRQDQFA+EEMRVLDVVM Sbjct: 2 GNRYGLIGANGCGKSTFMKILGGDLDPSAGTVMLDPNERLGKLRQDQFAFEEMRVLDVVM 61 Query: 87 MGHVEMWAAMSERDAIYANPDATDDDYMKAADLEAKFAEYDGYTAEARAGELLLGVGVPI 146 MGH EMWAAM+ERDAIYANPDATDDDYMKAADLEAKFAEYDGYTAE+RAGELLLG GV I Sbjct: 62 MGHTEMWAAMAERDAIYANPDATDDDYMKAADLEAKFAEYDGYTAESRAGELLLGAGVAI 121 Query: 147 EQHNGPMSNVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEEVLNERNSTMI 206 + H GPMSNV+PGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLE+VLNERNSTMI Sbjct: 122 DLHQGPMSNVSPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMI 181 Query: 207 IISHDRHFLNQVCTHMADMDYGTLKIYPGNYDDYMLASSQARAQQLAANAKAKEKVAELQ 266 IISHDRHFLNQVCTH+ADMDYGTLKIYPGNYDDYM AS+QAR QQLA NAKAK+KVAELQ Sbjct: 182 IISHDRHFLNQVCTHVADMDYGTLKIYPGNYDDYMFASTQARNQQLANNAKAKDKVAELQ 241 Query: 267 DFVRRFSANKSKARQATSRAKQIDKIKVEDIKPSSRVNPFVRFEGEKKLHRLAVETQSIT 326 +FVRRF+ANKSKARQATSRAKQI+KIKV+DIKPSSR PFVRF+GEKKLHRLAVE ++I+ Sbjct: 242 EFVRRFAANKSKARQATSRAKQIEKIKVDDIKPSSRAYPFVRFDGEKKLHRLAVEAETIS 301 Query: 327 KTYDRDIFKNFSIMVEAGEKIAIIGANGAGKTTLLRSIGG-DVAGLHPDSGEVKWAENAN 385 K +DR +FKNFSIMVEAGE+IAIIGANGAGKTTLLR IGG D++GL D G VKWAENAN Sbjct: 302 KAFDRQLFKNFSIMVEAGERIAIIGANGAGKTTLLRCIGGEDISGLSADQGRVKWAENAN 361 Query: 386 VGYMPQDPTEEFAGGETLTDWMGKWTQEGDDDQAVRGILGRLLFSGDDVKKSVKVLSGGE 445 VGYMPQDPTE+FA + LTDWMG+WTQEGDDDQAVR ILGRLLF GDDVKKSVKVLSGGE Sbjct: 362 VGYMPQDPTEDFASDKNLTDWMGQWTQEGDDDQAVRSILGRLLFGGDDVKKSVKVLSGGE 421 Query: 446 KGRMMYGKLMLGRHNVLLMDEPTNHMDMESIESLNIALEKYAGTLIFVSHDREFVSSLAT 505 KGRM YGKLMLGRHNVLLMDEPTNHMDMESIESLNIALEKYAGTLIFVSHDREFVSSLAT Sbjct: 422 KGRMTYGKLMLGRHNVLLMDEPTNHMDMESIESLNIALEKYAGTLIFVSHDREFVSSLAT 481 Query: 506 RILEVKDGQVIDFQGSYEDYLASQGIE 532 R+LEVKDG++IDFQG+YE+YL SQGIE Sbjct: 482 RVLEVKDGEIIDFQGTYEEYLTSQGIE 508 >gi|152981021|ref|YP_001353764.1| ABC transporter ATPase [Janthinobacterium sp. Marseille] Length = 657 Score = 303 bits (776), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 184/531 (34%), Positives = 285/531 (53%), Gaps = 30/531 (5%) Query: 12 GAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDVNERLGKLRQ 71 G KPL +N+ V G++ GLIGANG GKS+ +L G+L G + R+ + Q Sbjct: 3 GIKPLLDNVDVTLNPGDKIGLIGANGAGKSSLFGLLRGELHADLGTIDFPSKWRVAYVAQ 62 Query: 72 DQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYMKAADLEAKFAEYDGYTA 131 + E +D + G V + E + + PD D+ + +L + A+ D YT Sbjct: 63 ETPPLER-SAIDYAIDGDVTLRRLEEELAFLESEPDTLDNGVL-IGELYSALADADAYTV 120 Query: 132 EARAGELLLGVGVPIEQHNGPMSNVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTI 191 +RA +LLLG+G + Q + P+++ + GW++R+ LAQAL D+LLLDEPTN+LD++ I Sbjct: 121 RSRAEQLLLGLGFTMAQMDQPVASFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAI 180 Query: 192 RWLEEVLNERNSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNYDDYMLASSQARAQQ 251 WLE+ L T+I+ISHDR FL+ V + +D LK Y GNY + + RA Q Sbjct: 181 IWLEDWLKRYAGTLIVISHDRDFLDGVVNVIVHIDERKLKRYSGNYSGF----ERQRAAQ 236 Query: 252 LAANAKAKEKV----AELQDFVRRFSANKSKARQATSRAKQIDKIK------------VE 295 + A EK A L+ F+ RF A SKARQA SR K + K++ E Sbjct: 237 MILAQSAMEKQARQRAHLESFINRFKAQASKARQAQSRMKALSKMEELAPLRAAAEFSFE 296 Query: 296 DIKPSSRVNPFVRFEGEKKLHRLAVETQ-SITKTYDRDIFKNFSIMVEAGEKIAIIGANG 354 +P++ NP + E +R+ E SIT ++ I + ++ G++I ++G NG Sbjct: 297 FREPANAPNPLLVMEDVDAGYRIEDEKDYSIT---EKKIVSGINFSLQIGQRIGLLGVNG 353 Query: 355 AGKTTLLRSIGGDVAGLHPDSGEVKWAENANVGYMPQDPTEEFAGGETLTDWMGKWTQEG 414 AGK+TL+++I G+ L P +G ++ + +GY Q E E+ W Sbjct: 354 AGKSTLIKTIAGE---LEPLNGSSQFGKGLAIGYFAQHQVEMLRHEESPL-WHLAHIAPT 409 Query: 415 DDDQAVRGILGRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHMDME 474 +Q +R LG F+G V + SGGEK R+ ++ R N+LL+DEPTNH+D+E Sbjct: 410 VREQELRNFLGSFNFNGAMVTSKIAPFSGGEKARLALALIVWQRPNLLLLDEPTNHLDLE 469 Query: 475 SIESLNIALEKYAGTLIFVSHDREFVSSLATRILEVKDGQVIDFQGSYEDY 525 + E+L +AL ++ GTL+ VSHDR + + + + V DG++ F G +DY Sbjct: 470 TREALTMALAQFEGTLVVVSHDRHLLRATTDQFIIVADGKLQPFDGDLDDY 520 >gi|152980787|ref|YP_001354212.1| ATP-binding ABC transporter protein [Janthinobacterium sp. Marseille] Length = 636 Score = 243 bits (620), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 167/540 (30%), Positives = 283/540 (52%), Gaps = 31/540 (5%) Query: 1 VLSTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSL 60 V+S +N + FG PL ++ R GLIG NG GKS+ +KI+ G + G + Sbjct: 3 VISLSNAQLAFGHVPLLDHAEFSLETTERVGLIGRNGTGKSSLLKIIAGRSKLDDGLFVM 62 Query: 61 DVNERLGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYM--KAAD 118 ++ + Q+ EM V D V G +M A ++E DA+ +DD + + + Sbjct: 63 QQGIKIAYVEQEPHFSPEMSVFDAVASGMGDMQALLAEYDALTGQFGGDNDDALMERMHE 122 Query: 119 LEAKFAEYDGYTAEARAGELLLGVGVPIEQHNGPMSNVAPGWKLRVLLAQALFSNPDILL 178 ++ K D + + L + + + M ++ G + RV LA AL S PD+LL Sbjct: 123 IQLKLDAADAWNLTNKVEATLDRLNLV---KDALMGTLSGGMQKRVALACALVSAPDVLL 179 Query: 179 LDEPTNNLDINTIRWLEEVLNERNSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNYD 238 LDEPTN+LD +I WLE +L + +++ I+HDR FL+ V T + ++D G L +PGN+ Sbjct: 180 LDEPTNHLDFTSILWLEGLLRDYKGSVLFITHDRSFLDNVATRIIELDRGRLLSFPGNFS 239 Query: 239 DYMLASSQARAQQLAANAKAKEKVAELQDFVRRFSANKSKARQATSRAKQIDKIKVEDIK 298 Y + ++ + NAK + +A+ + ++R+ +++ + R ++++ ++ + Sbjct: 240 AYQVRKAEQLEIEEVENAKFDKFLAQEEIWIRK--GVQARRTRDEGRVRRLEALR---LT 294 Query: 299 PSSRVNPFVRFEGEKKLH--------RLAVETQSITKTY-DRDIFKNFSIMVEAGEKIAI 349 S+R +G+ KL ++ E ++I KTY D+ I ++FS + G+KI + Sbjct: 295 RSARREQ----QGQVKLDVSSGDRSGKIVAELENINKTYGDKVIVRDFSATLLRGDKIGL 350 Query: 350 IGANGAGKTTLLRSIGGDVAGLHPDSGEVKWAENANVGYMPQ---DPTEEFAGGETLTDW 406 IG NGAGKTTLL+ I G+ PDSG VK + Y Q EE + +T+ Sbjct: 351 IGLNGAGKTTLLKMILGEE---EPDSGTVKQGTKLQIAYFDQMRAQLNEEASLADTIAPG 407 Query: 407 MGKWTQEGDDDQAVRGILGRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDE 466 W + + V L LF+ + + VK LSGGE+ R++ +L NVL++DE Sbjct: 408 -SDWVEINGQRKHVMTYLNDFLFAPERARSPVKSLSGGERNRLLLARLFAKPANVLVLDE 466 Query: 467 PTNHMDMESIESLNIALEKYAGTLIFVSHDREFVSSLATRILEVK-DGQVIDFQGSYEDY 525 PTN +D++++E L LE Y GT+ VSHDR F+ ++ T+++ + +G ++ G Y D+ Sbjct: 467 PTNDLDIDTLELLEELLEDYKGTVFLVSHDRTFLDNVVTQVIVAEGNGLWREYIGGYSDW 526 >gi|152981164|ref|YP_001355224.1| putative ABC transporter ATP-binding protein [Janthinobacterium sp. Marseille] Length = 555 Score = 234 bits (597), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 171/526 (32%), Positives = 270/526 (51%), Gaps = 20/526 (3%) Query: 14 KPLFENISVKFGDGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDVNERLGKLRQDQ 73 + + ++IS+ F G + G++G NG GKST +KI+ G G N +G L Q+ Sbjct: 19 RQILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGIDTDIIGEARPAPNLNIGYLPQEP 78 Query: 74 FAYEEMRVLDVVMMGHVEMW---AAMSERDAIYANPDATDDDY-MKAADLEAKFAEYDGY 129 E V V G E++ A + E A YA PDA D + A LEA + G Sbjct: 79 QLDPEQTVRQAVEGGLGEVFEAKAKLEEVYAAYAEPDADFDALATEQARLEAIISTSAGD 138 Query: 130 TAEARAGELLLGVGVPIEQHNGPMSNVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDIN 189 E + + +P + + ++ G K RV L + L S PD+LLLDEPTN+LD Sbjct: 139 NPEQQLEMAADALRLP--PWDAKIGVLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLDAE 196 Query: 190 TIRWLEEVLNERNSTMIIISHDRHFLNQVCTHMADMDYGTLKIYPGNYDDYMLASSQARA 249 ++ WLE+ L T++ I+HDR+FL+ + ++D G + GNY ++ Sbjct: 197 SVDWLEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKGDRLK 256 Query: 250 QQLAANAKAKEKVAELQDFVRRFSANKSKARQATSRAK--QIDKIKVEDIKPSSRVNPFV 307 Q+ A+ + ++ +A+ ++VR+ K RQA S+A+ + +++ + + + Sbjct: 257 QEEASESSRQKTIAKELEWVRQ----NPKGRQAKSKARLARFNELSEHEYQKRNETQEIF 312 Query: 308 RFEGEKKLHRLAVETQSITKTY-DRDIFKNFSIMVEAGEKIAIIGANGAGKTTLLRSIGG 366 E+ L +E ++++K + DR + N S + AG + IIG NGAGK+TL + I G Sbjct: 313 IPVAER-LGNEVIEFKNVSKAFGDRLLIDNLSFRIPAGAIVGIIGPNGAGKSTLFKMITG 371 Query: 367 DVAGLHPDSGEVKWAENANVGYMPQDPTEEFAGGETLTDWMG--KWTQEGDDDQAVRGIL 424 PDSGEV A V + Q G D G G + R L Sbjct: 372 KE---QPDSGEVVIGTTAKVSIVDQSRDTLNDGKTVFEDVTGGADILTVGRFEMPSRAYL 428 Query: 425 GRLLFSGDDVKKSVKVLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHMDMESIESLNIALE 484 GR F G D +K V LSGGE+GR+ K +L NVLL+DEP+N +D+E++ +L AL Sbjct: 429 GRFNFKGGDQQKIVGNLSGGERGRLHLAKTLLMGGNVLLLDEPSNDLDVETLRALEDALL 488 Query: 485 KYAGTLIFVSHDREFVSSLATRILEVK-DGQVIDFQGSYEDYLASQ 529 ++AG+++ +SHDR F+ +AT IL + + QV F G+Y++Y A + Sbjct: 489 EFAGSVLVISHDRWFLDRIATHILAFEGNSQVSFFDGNYQEYEADK 534 Score = 116 bits (291), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/238 (31%), Positives = 124/238 (52%), Gaps = 42/238 (17%) Query: 331 RDIFKNFSIMVEAGEKIAIIGANGAGKTTLLRSIGGDVAGLHPDS-GEVKWAENANVGYM 389 R I K+ S+ G KI ++G NG+GK+TLL+ + AG+ D GE + A N N+GY+ Sbjct: 19 RQILKDISLSFFPGAKIGVLGLNGSGKSTLLKIM----AGIDTDIIGEARPAPNLNIGYL 74 Query: 390 PQDPT----------------EEFAGGETLTDWMGKWTQEGDDDQAVRGILGRL-----L 428 PQ+P E F L + + + D A+ RL Sbjct: 75 PQEPQLDPEQTVRQAVEGGLGEVFEAKAKLEEVYAAYAEPDADFDALATEQARLEAIIST 134 Query: 429 FSGDDVKKSVK----------------VLSGGEKGRMMYGKLMLGRHNVLLMDEPTNHMD 472 +GD+ ++ ++ VLSGGEK R+ +L+L + ++LL+DEPTNH+D Sbjct: 135 SAGDNPEQQLEMAADALRLPPWDAKIGVLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLD 194 Query: 473 MESIESLNIALEKYAGTLIFVSHDREFVSSLATRILEVKDGQVIDFQGSYEDYLASQG 530 ES++ L L+++ GT++ ++HDR F+ + A ILE+ G I ++G+Y +L +G Sbjct: 195 AESVDWLEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKG 252 >gi|152981020|ref|YP_001352897.1| ABC-type uncharacterized transport system, duplicated ATPase component [Janthinobacterium sp. Marseille] Length = 533 Score = 99.8 bits (247), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 134/569 (23%), Positives = 235/569 (41%), Gaps = 107/569 (18%) Query: 1 VLSTANITMQFGAKPLFENISVKFGDGNRYGLIGANGCGKS-TFMKILGGDLEPSAGNVS 59 +L N+ + F + ++S G ++ L+G +G GK+ T + +L + + + G Sbjct: 3 LLDIQNLQVSFDTSKVVNDVSFSIAAGEKFALVGESGSGKTVTALSLLRLNQDATYGGKI 62 Query: 60 LDVNERLGKLRQDQFAYEEMRVLDVVMMGHVEMWAAMSERDAIYANPDATDDDYMKAADL 119 L + + L++ + A +R DV M+ M A NP T + + Sbjct: 63 LFEGQDI--LQKTEAAMRSVRGNDVAMIFQEPMTAL---------NPLFTIGNQIAEV-- 109 Query: 120 EAKFAEYDGYTAEA---RAGELLLGVGVPIEQHNG---PMSNVAPGWKLRVLLAQALFSN 173 ++G +A A R ELL G+P Q P ++ G + R ++A AL Sbjct: 110 ---LMLHEGISARAAALRTVELLDKTGIPEPQRRALSYP-HELSGGQRQRAMIAMALACK 165 Query: 174 PDILLLDEPTNNLDINTIRWLEEVLN----ERNSTMIIISHDRHFLNQVCTHMADMDYGT 229 P +L+ DEPT LD+ + E+LN E N +++I+HD + + + M+ G Sbjct: 166 PKLLIADEPTTALDVTIQVQIVELLNQLQREENMAVLMITHDLNLVRHFADRVGVMEKGR 225 Query: 230 LKIYPGNYDDYMLASSQARAQQLAANAKAKEKVAELQDFVRRFSANKSKARQATSRAKQI 289 L A QQL FSA R+A ++ Sbjct: 226 LL-------------EVATTQQL-------------------FSA----PREAYTK---- 245 Query: 290 DKIKVEDIKPSSRVNPFVRFEGEKKLHRLAVETQSITKTYDRDIFKNFSIMV-------- 341 K+ +P VN V E L L E S T + FK + Sbjct: 246 ---KLLASQPHQLVN--VVSEAATPL--LKAEQVSCTFDIKKGWFKKIPFVAVDQVDVQV 298 Query: 342 EAGEKIAIIGANGAGKTTL----LRSIGGDVAG--------LHPDSGEVKWAENANVGYM 389 + GE + I+G +G+GK+TL LR G V G + S + A + + Sbjct: 299 KPGETLGIVGESGSGKSTLGLALLRLSGAHVKGEIAFDGQAITHQSRDALRPLRARMQIV 358 Query: 390 PQDPTEEFAGGETLTDWMGKWTQEGDDDQAVRGI-------LGRLLFSGDDVKKSVKVLS 442 QDP + T+ +G+ GI L + S + + + S Sbjct: 359 FQDPFASLSPRRTVEQIVGEGLALHQPQLGPHGIRKAVADGLQEVGLSAEMMTRYPHEFS 418 Query: 443 GGEKGRMMYGKLMLGRHNVLLMDEPTNHMDMESIESLNIAL----EKYAGTLIFVSHDRE 498 GG++ R+ + ++ + +++L+DEPT+ +D+ + + L +KY IF+SHD Sbjct: 419 GGQRQRIAIARALVLKPDLILLDEPTSSLDVSVQHQVLLLLADLQKKYGMAYIFISHDLA 478 Query: 499 FVSSLATRILEVKDGQVIDFQGSYEDYLA 527 + ++A R++ +KDG+V++ QG + L+ Sbjct: 479 VIRAMAHRVMVMKDGRVVE-QGLTQTVLS 506 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.316 0.134 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,226,877 Number of extensions: 51917 Number of successful extensions: 517 Number of sequences better than 1.0e-08: 25 Number of HSP's gapped: 494 Number of HSP's successfully gapped: 30 Length of query: 532 Length of database: 1,221,021 Length adjustment: 88 Effective length of query: 444 Effective length of database: 895,685 Effective search space: 397684140 Effective search space used: 397684140 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)