BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2064.p
         (185 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981408|ref|YP_001353698.1| hypothetical protein mma_2008 [...   257   3e-70
gi|152980375|ref|YP_001354124.1| 5-amino-6-(5-phosphoribosylamin...    69   3e-13
gi|152981801|ref|YP_001353377.1| hypothetical protein mma_1687 [...    66   1e-12
gi|152981769|ref|YP_001352932.1| cytosine/adenosine deaminase [J...    55   3e-09

>gi|152981408|ref|YP_001353698.1| hypothetical protein mma_2008
           [Janthinobacterium sp. Marseille]
          Length = 159

 Score =  257 bits (657), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 121/151 (80%), Positives = 130/151 (86%)

Query: 14  DLRHMRAALDQANNAWALGEVPVGAVVVKDGVVIASGFNQPIGKHDPTAHAEIMALRRAA 73
           D   MR ALDQA NAW LGEVPVGAVVVKDG VIA+GFNQPIG HDPTAHAEIMALR AA
Sbjct: 3   DAIFMRQALDQARNAWTLGEVPVGAVVVKDGEVIATGFNQPIGTHDPTAHAEIMALRAAA 62

Query: 74  EKLGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVYGAADPKTGACGSVVNLFEQERLN 133
             LGNYRLPGCEL+VTLEPCVMCSGAMMHARLARVV+GA DPKTGACGSVVNLFEQ +LN
Sbjct: 63  SILGNYRLPGCELFVTLEPCVMCSGAMMHARLARVVFGAPDPKTGACGSVVNLFEQNQLN 122

Query: 134 HHTALLGGVMAEECGQLLKEFFAMRREQVKQ 164
           HHT  +GGV+A+EC  LLK+FFA RR+  K 
Sbjct: 123 HHTQFIGGVLADECSALLKDFFAERRKAAKS 153


>gi|152980375|ref|YP_001354124.1|
           5-amino-6-(5-phosphoribosylamino)uracil reductase
           [Janthinobacterium sp. Marseille]
          Length = 363

 Score = 68.6 bits (166), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 14/117 (11%)

Query: 13  ADLRHMRAALD-QANNAWALGEVP-VGAVVVKDGVVIASGFNQPIGKHDPTAHAEIMALR 70
           +D++ +R AL+  A   +     P VG V+VK+  VI SG+ QP+G     AHAE+ AL 
Sbjct: 5   SDVQGIRLALELAAKGMFTTTPNPRVGCVIVKENKVIGSGYTQPVGH----AHAEVQALN 60

Query: 71  RAAEKLGNYRLPGCELYVTLEPCVM------CSGAMMHARLARVVYGAADPKTGACG 121
            AA++   + + G  +YVTLEPC        C+ A++ AR+ARVV   ADP     G
Sbjct: 61  DAADR--GFDVSGSTVYVTLEPCSHHGRTPPCADALIKARVARVVAAIADPNPLVAG 115


>gi|152981801|ref|YP_001353377.1| hypothetical protein mma_1687
           [Janthinobacterium sp. Marseille]
          Length = 150

 Score = 65.9 bits (159), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 52/95 (54%)

Query: 16  RHMRAALDQANNAWALGEVPVGAVVVKDGVVIASGFNQPIGKHDPTAHAEIMALRRAAEK 75
           + +R A+  A +  A G  P GAV+   G  IA G N  +  +DPT HAE+ A+R A++K
Sbjct: 7   KFLREAVRLAQDNKARGGRPFGAVLAVGGESIAIGVNNIVHSNDPTTHAEMEAIRVASQK 66

Query: 76  LGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVY 110
           LG   L G  +Y +  PC MC  AM+   +  V Y
Sbjct: 67  LGRPNLKGSVIYASGHPCPMCLAAMLLTGVDEVYY 101


>gi|152981769|ref|YP_001352932.1| cytosine/adenosine deaminase
           [Janthinobacterium sp. Marseille]
          Length = 169

 Score = 55.1 bits (131), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 2/107 (1%)

Query: 10  ITEADLRHMRAALDQANNAWALGEVPVGAVVVKD--GVVIASGFNQPIGKHDPTAHAEIM 67
           ++  DL  +R ++  +  +   G  P  A+V  +   V++ +G N    + DPT HAE++
Sbjct: 12  LSTRDLELLRQSIALSEESKQRGRHPFAALVADEHGNVIVTAGNNSMPPEGDPTQHAELL 71

Query: 68  ALRRAAEKLGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVYGAAD 114
           A  RAA+KL   +L    LY + EPC MCSGA+    + RVVY  ++
Sbjct: 72  AAARAAQKLSPEQLAKSTLYTSAEPCCMCSGAIYWTGIGRVVYALSE 118


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.132    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 382,956
Number of extensions: 12591
Number of successful extensions: 52
Number of sequences better than 1.0e-08: 4
Number of HSP's gapped: 51
Number of HSP's successfully gapped: 4
Length of query: 185
Length of database: 1,221,021
Length adjustment: 78
Effective length of query: 107
Effective length of database: 932,655
Effective search space: 99794085
Effective search space used: 99794085
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 127 (53.5 bits)