BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2062.p
         (229 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981565|ref|YP_001353700.1| organic radical activating enzy...   350   5e-98

>gi|152981565|ref|YP_001353700.1| organic radical activating enzyme
           [Janthinobacterium sp. Marseille]
          Length = 211

 Score =  350 bits (897), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 162/211 (76%), Positives = 181/211 (85%)

Query: 19  VTYSIKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGREEDRARAICQFCDTDFVGTDGEN 78
           +TYS+KEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGRE DRA A+CQFCDTDFVGT+GE 
Sbjct: 1   MTYSVKEIFYTLQGEGAHAGRPAVFCRFSGCNLWTGRESDRATAVCQFCDTDFVGTNGEG 60

Query: 79  GGKFKSAEALAAKIDSLWPATYAPSKYVVFTGGEPLLQLDAALIAAMHAVGFEIAIETNG 138
           GGKF     LA  I++LWP +YA SKYVVFTGGEPLLQLD  LI AMHAVGFEIAIETNG
Sbjct: 61  GGKFVDGSTLAHTINALWPESYAASKYVVFTGGEPLLQLDTELIDAMHAVGFEIAIETNG 120

Query: 139 TIAVPEGVDWICVSPKMGAELKVTRGSELKVVVPQAGQPLAHYETLDFQHFLLQPMDGPQ 198
           T+ VP GVDWICVSPKMG++L V +GSELKVV+PQA Q LA YE L+F+HF +QPMDGP 
Sbjct: 121 TLPVPAGVDWICVSPKMGSQLVVRKGSELKVVIPQAEQSLAAYEALEFEHFFVQPMDGPL 180

Query: 199 AAANTRLAIEMVKHNPKWKLSIQTHKLLNIP 229
           A  NT+LAI++ K NPKWKLS+QTHKLL IP
Sbjct: 181 AEQNTKLAIDVCKRNPKWKLSLQTHKLLQIP 211


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.137    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 571,142
Number of extensions: 24485
Number of successful extensions: 57
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 57
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 1,221,021
Length adjustment: 80
Effective length of query: 149
Effective length of database: 925,261
Effective search space: 137863889
Effective search space used: 137863889
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)