BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2056.p
         (143 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981496|ref|YP_001353727.1| oligoketide cyclase/lipid trans...   240   3e-65

>gi|152981496|ref|YP_001353727.1| oligoketide cyclase/lipid
           transport protein [Janthinobacterium sp. Marseille]
          Length = 143

 Score =  240 bits (612), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 105/143 (73%), Positives = 126/143 (88%)

Query: 1   MAVVHKTVLINYSAEQMFNLVDKVEDYPEFLPWCGGVEVSERSDESLTAKIKISYHGLKQ 60
           MAVVHK+VL+ YSAEQMF LVD+VEDYP+FLPWCGGVEV +R ++ L A I I+YHG+KQ
Sbjct: 1   MAVVHKSVLLGYSAEQMFALVDRVEDYPQFLPWCGGVEVKQREEDRLVASIMINYHGVKQ 60

Query: 61  SFSTQNTNVRPTSMTMRLVEGPFKHFEGRWTFKPLREDACKIEFDMQYEFSSRILESVIG 120
           SF+T+NTNVRP SMTMRL+EGPFK   G WTFKPLREDACKI+FD+QYEFS+R++E +IG
Sbjct: 61  SFTTENTNVRPVSMTMRLLEGPFKQLHGTWTFKPLREDACKIDFDLQYEFSNRLIEQIIG 120

Query: 121 PVFSMIANSFVDSFCKRAEQIYG 143
           PVF+MIA SFVDSF KRA+ +YG
Sbjct: 121 PVFNMIATSFVDSFSKRADAVYG 143


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.135    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 284,946
Number of extensions: 9570
Number of successful extensions: 14
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 143
Length of database: 1,221,021
Length adjustment: 75
Effective length of query: 68
Effective length of database: 943,746
Effective search space: 64174728
Effective search space used: 64174728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)