BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2048.p (804 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980641|ref|YP_001353731.1| phosphoenolpyruvate synthase [J... 1436 0.0 gi|152981209|ref|YP_001351865.1| phosphoenolpyruvate-protein pho... 81 3e-16 >gi|152980641|ref|YP_001353731.1| phosphoenolpyruvate synthase [Janthinobacterium sp. Marseille] Length = 812 Score = 1436 bits (3716), Expect = 0.0, Method: Compositional matrix adjust. Identities = 683/793 (86%), Positives = 741/793 (93%) Query: 12 YVASFENLRMTDVESVGGKNASLGEMISQLAGAGVRVPGGFATTAQAFRDFLEHSADGGP 71 YV SF+ LRM+DV+SVGGKN+SLGEMISQLA AGVRVPGGFATTAQAFRDFL +S +GG Sbjct: 19 YVVSFDRLRMSDVDSVGGKNSSLGEMISQLAEAGVRVPGGFATTAQAFRDFLTYSENGGL 78 Query: 72 TLAARIAKRLEGLDIDDVRALAQAGAEIRQWIVETPFQPRLDQEIRAFYDKLVADSTAEM 131 +LA RIA RL L+IDDVRALAQAGAEIRQWIV+TPFQP+L Q+I +Y L ADS+ EM Sbjct: 79 SLAQRIADRLANLNIDDVRALAQAGAEIRQWIVDTPFQPQLLQDITQYYKDLAADSSKEM 138 Query: 132 SFAVRSSATAEDLPDASFAGQQETFLNVVGIDNVLEAMKHVFASLYNDRAISYRVHKGFT 191 SFAVRSSATAEDLPDASFAGQQETFLNVVGIDNVLEA+KHVFASLYNDRAISYRVHKGFT Sbjct: 139 SFAVRSSATAEDLPDASFAGQQETFLNVVGIDNVLEAIKHVFASLYNDRAISYRVHKGFT 198 Query: 192 HAEVALSAGVQRMVRSDVGAAGVMFTIDTESGFKDVVFITSSYGLGETVVQGAVNPDEYY 251 HAEVALSAGVQRMVRSD GAAGVMFT+DTESGF+DVVFITSSYGLGETVVQGAVNPDE+Y Sbjct: 199 HAEVALSAGVQRMVRSDKGAAGVMFTLDTESGFQDVVFITSSYGLGETVVQGAVNPDEFY 258 Query: 252 VHKPMLELGKQPVIRRNLGSKLIKMEFTGEAKAGRSVKTVDVPVELRNRYSLTDAEVVEL 311 VHKPMLELGK P+IRRN+GSKLIKMEFT EAKAGRSV+TVDVP+ +RNRYSLTD E+VEL Sbjct: 259 VHKPMLELGKLPIIRRNIGSKLIKMEFTEEAKAGRSVRTVDVPIGMRNRYSLTDEEIVEL 318 Query: 312 AKYATIIEKHYQRPMDIEWGKDGRDGKLYILQARPETVKSQQKATDAQQRFKLKSSGTVL 371 AKYA IIEKHY RPMDIEWGKDG DGKLYILQARPETVKSQQK+TD QQRFKLK SG+VL Sbjct: 319 AKYAVIIEKHYGRPMDIEWGKDGIDGKLYILQARPETVKSQQKSTDVQQRFKLKGSGSVL 378 Query: 372 ATGRAIGQKIGAGPVRVISDPAEMERVQPGDVLVADMTDPNWEPVMKRASAIVTNRGGRT 431 GRAIGQKIGAGPVRVI D A+MERVQPGDVLVADMTDPNWEPVMKRASAIVTNRGGRT Sbjct: 379 TVGRAIGQKIGAGPVRVILDAADMERVQPGDVLVADMTDPNWEPVMKRASAIVTNRGGRT 438 Query: 432 CHAAIIARELGVPAVVGCGDATEVLKDGNLVTVSCAEGDEGKIYDGLLETEVTEVARGEL 491 CHAAIIARELGVPAVVGCGDATE+L DG LVTVSCAEGDEGK+YDGLLETEVTE ARG+L Sbjct: 439 CHAAIIARELGVPAVVGCGDATELLTDGTLVTVSCAEGDEGKVYDGLLETEVTEFARGDL 498 Query: 492 PPIPLKVMMNVGNPQLAFDFQSIPNGGVGLARLEFIINNNIGVHPKAILEYPNIDADLKK 551 P +PLK+ +NVGNPQLAFDFQSIPN GVGLARLEFIINNNIGVHPKAILEYP+IDADLK Sbjct: 499 PELPLKITLNVGNPQLAFDFQSIPNAGVGLARLEFIINNNIGVHPKAILEYPHIDADLKT 558 Query: 552 AVESVARGHASPKAFYVDKLAEGIATIAAAFWPKPVIVRLSDFKSNEYKKLIGGSRYEPD 611 AVESVARGHASPKAFY+DKLAEGIATI AAFWPKPVIVRLSDFKSNEYKKLIGGSRYEPD Sbjct: 559 AVESVARGHASPKAFYIDKLAEGIATIGAAFWPKPVIVRLSDFKSNEYKKLIGGSRYEPD 618 Query: 612 EENPMLGFRGAARYLAHDFAEAFQMECQAMKRVREDMGLTNVEVMVPFVRTLGQAEKVIG 671 EENPMLGFRG ARYLA DFAE+F+MEC+AMKRVR++MGLTNVE+MVPFVRTLGQAEKVI Sbjct: 619 EENPMLGFRGVARYLAPDFAESFEMECKAMKRVRDEMGLTNVEIMVPFVRTLGQAEKVID 678 Query: 672 LLGKYGLKRGENGLRVIMMCEVPSNAILADQFLEHFDGFSIGSNDLTQLTLGLDRDSGME 731 LL K GLKRGENGLR++MMCEVPSNAILA++FL +FDGFSIGSNDLTQLTLGLDRDSGME Sbjct: 679 LLAKNGLKRGENGLRIVMMCEVPSNAILAEEFLNYFDGFSIGSNDLTQLTLGLDRDSGME 738 Query: 732 LLAADFDERDPAVQALLTKVITTCREKGKYVGICGQGPSDHPDFAQWLMEQGIESISLNP 791 +LAADFDERDPAV A+ ++ I CR++GKYVGICGQGPSDHPDFA+WLM++GI S+SLNP Sbjct: 739 ILAADFDERDPAVLAMFSRAIAACRKQGKYVGICGQGPSDHPDFAEWLMKEGITSLSLNP 798 Query: 792 DTVIDTWQQLAKK 804 D+VI+TWQ LAK+ Sbjct: 799 DSVIETWQNLAKR 811 >gi|152981209|ref|YP_001351865.1| phosphoenolpyruvate-protein phosphotransferase [Janthinobacterium sp. Marseille] Length = 582 Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 93/404 (23%), Positives = 171/404 (42%), Gaps = 69/404 (17%) Query: 424 VTNRGGRTCHAAIIARELGVPAVVGCGDATEVLKDGNLVTVSCAEGDEGKI--------Y 475 +T+ GG+ H AI+AR L +PA VG +A+E++ G+ + + +GD G + Sbjct: 188 ITDVGGQNSHTAIVARSLDIPATVGVSNASELIVQGDWLII---DGDAGVVVVDPTPVVL 244 Query: 476 DGLLETEVTEV----ARGEL---PPI-----PLKVMMNVGNPQLAFDFQSIPNGGVGLAR 523 D E + +V G+L P + P+ ++ N+ P G+GL R Sbjct: 245 DQYREKQARQVRDRKKLGKLKKTPSLTLDGTPITLLANIEFPDDCAHAMDAGAHGIGLFR 304 Query: 524 LEFIINNNIGVHPKAILEYPNIDADLKKAVESVARGHASPKAFYVDKLAEGIATIAAAFW 583 EF+ G K P+ D + ES R + K Sbjct: 305 SEFLFMGRTGHANK----LPSED----EQFESYKRAVIAMKG------------------ 338 Query: 584 PKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGAARYLAHDFAEAFQMECQAMKR 643 +PV +R D +++ E NP LG R A R+ + + F + +A+ R Sbjct: 339 -RPVTIRTLDIGADKPLDF-----AEQTALNPALGLR-AIRFCLSE-PQMFLTQLRAILR 390 Query: 644 VREDMGLTNVEVMVPFVRTLGQAEKVIGLLGKYGLKRGENGLR------VIMMCEVPSNA 697 V+++VP + + ++ + ++ + + E ++ V M E+P+ A Sbjct: 391 AS---AFGPVKLLVPMLAHAFEIDQTLLMIEQAKAQLREEKIKFDPVLPVGAMIEIPAAA 447 Query: 698 ILADQFLEHFDGFSIGSNDLTQLTLGLDRDSGMELLAADFDERDPAVQALLTKVITTCRE 757 + F++ D S+G+NDL Q TL +DR +A ++ PAV LL+ I + Sbjct: 448 LTLPLFIKRMDFLSLGTNDLIQYTLAIDRVD--HEVAHLYNPLHPAVLYLLSSTIAIAAK 505 Query: 758 KGKYVGICGQGPSDHPDFAQWLMEQGIESISLNPDTVIDTWQQL 801 G + +CG+ D + + L+ G+ S++P ++ ++ Sbjct: 506 AGVPISVCGEMAGD-INMTRLLLGMGLREFSMHPSQLLSVKNEI 548 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.318 0.135 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,898,269 Number of extensions: 82843 Number of successful extensions: 237 Number of sequences better than 1.0e-08: 2 Number of HSP's gapped: 236 Number of HSP's successfully gapped: 2 Length of query: 804 Length of database: 1,221,021 Length adjustment: 91 Effective length of query: 713 Effective length of database: 884,594 Effective search space: 630715522 Effective search space used: 630715522 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)