BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2042.p
         (262 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980337|ref|YP_001353736.1| UDP-N-acetylglucosamine acyltra...   437   e-124
gi|152980152|ref|YP_001353738.1| UDP-3-O-[3-hydroxymyristoyl] gl...    60   1e-10

>gi|152980337|ref|YP_001353736.1| UDP-N-acetylglucosamine
           acyltransferase [Janthinobacterium sp. Marseille]
          Length = 262

 Score =  437 bits (1125), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/262 (79%), Positives = 230/262 (87%)

Query: 1   MSKIHPSAVIAPGAQIDDSVEIGAYAVIGPDVRIGAGTRIGPHVVIEGHTRIGRDNEIFQ 60
           MS IHP+A++ P AQ+D SVE+G Y VIGPDV IGAG++IGPHVV+EGHT IG DN+IFQ
Sbjct: 1   MSLIHPTAIVDPKAQLDSSVEVGPYTVIGPDVVIGAGSKIGPHVVVEGHTTIGADNKIFQ 60

Query: 61  FASIGAAPQDKKYAGEPTTMEIGDRNTIREFVTFNRGTVQDAGATRIGNDNWIMAYVHLA 120
           FASIGAAPQDKKYAGEPT + IGDRNTIREFVT N GT QD G TR+GNDNWIMAYVH+A
Sbjct: 61  FASIGAAPQDKKYAGEPTLLTIGDRNTIREFVTINLGTSQDVGITRLGNDNWIMAYVHIA 120

Query: 121 HDCQLGSHIILANNATLAGHVHLGDHVFLGGFTTVHQFCHIGAHAMTAFTAAVSQDVPPF 180
           HDCQLGS+IILANNATLAGHVHL D VFLGGFT+VHQFC IGAHAMTAFTAAVSQD+PPF
Sbjct: 121 HDCQLGSNIILANNATLAGHVHLEDWVFLGGFTSVHQFCRIGAHAMTAFTAAVSQDIPPF 180

Query: 181 VTAAGNRAVPSGINSEGLRRRGFSSEQIMEIKRAYKVIYRAGLPLEEAKQQLAEMEAKSA 240
           VTAAGNRAVP+GINSEGL+RRGFSSEQIM IKR YK IYR+GLPLEEAK  L   E KS 
Sbjct: 181 VTAAGNRAVPAGINSEGLKRRGFSSEQIMAIKRGYKTIYRSGLPLEEAKLALQAEEEKSP 240

Query: 241 HSAEHIRLLREFIEASARGIIR 262
            +A+++R LREFIEAS RGIIR
Sbjct: 241 DAAQYLRQLREFIEASPRGIIR 262


>gi|152980152|ref|YP_001353738.1| UDP-3-O-[3-hydroxymyristoyl]
           glucosamine N-acyltransferase [Janthinobacterium sp.
           Marseille]
          Length = 350

 Score = 60.1 bits (144), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 81/199 (40%), Gaps = 28/199 (14%)

Query: 4   IHPSAVIAPGAQIDDSVEIGAY------------------AVIGPDVRIGAGTRIGPHVV 45
           IHPSA + P AQI  S  IG +                    IG D R+G+GT   P V 
Sbjct: 105 IHPSASVDPTAQIAASASIGPFVAVEAGAVIEDGCVIDAGCFIGRDARVGSGTHFYPRVT 164

Query: 46  IEGHTRIGRDNEIFQFASIGA-----APQDKKYAGEPTT--MEIGDRNTIREFVTFNRGT 98
                RIG    I   A IGA     A +   Y   P T  + IGD   I    + +RG 
Sbjct: 165 FLAGCRIGARGIIHSGAVIGADGFGFANEGGVYIKIPQTGAVRIGDDVEIGANTSIDRGA 224

Query: 99  VQDAGATRIGNDNWIMAYVHLAHDCQLGSHIILANNATLAGHVHLGDHVFLGGFTTVHQF 158
           + D   T + +   +   + + H+C +G+H  +A    +AG   +G +   GG   V   
Sbjct: 225 LAD---TVLEDGVKLDNQIQIGHNCHIGAHTAMAGCVGVAGSAIIGKYCTFGGAAMVLGH 281

Query: 159 CHIGAHAMTAFTAAVSQDV 177
             I  H   +  + VS+ +
Sbjct: 282 LTIADHVHISSGSMVSRSI 300


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 618,560
Number of extensions: 26527
Number of successful extensions: 95
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 80
Number of HSP's successfully gapped: 2
Length of query: 262
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 181
Effective length of database: 921,564
Effective search space: 166803084
Effective search space used: 166803084
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 128 (53.9 bits)