BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2025.p (758 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981048|ref|YP_001355244.1| ABC-type multidrug transport sy... 1081 0.0 gi|152982656|ref|YP_001351943.1| ABC-type multidrug transport sy... 330 2e-91 gi|152981121|ref|YP_001351944.1| ABC-type multidrug transport sy... 326 4e-90 gi|152981213|ref|YP_001352884.1| ABC-type multidrug transport sy... 302 4e-83 gi|152982174|ref|YP_001352225.1| ABC-type multidrug transport sy... 293 3e-80 >gi|152981048|ref|YP_001355244.1| ABC-type multidrug transport system, ATPase and permease components [Janthinobacterium sp. Marseille] Length = 705 Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust. Identities = 552/705 (78%), Positives = 605/705 (85%), Gaps = 17/705 (2%) Query: 49 LLLATDTRLLACGPDGQPAQHWEYRPELQLKHYDHAGVGTLELCDGAGRLAAWRYTLAQN 108 +++ T+ +LL+ Q W R +L LKH+DHAGVGTLEL D RLA WRYTLAQN Sbjct: 4 IVILTNLQLLSRSHGESTWQAWPLRADLALKHHDHAGVGTLELHDTKARLAQWRYTLAQN 63 Query: 109 PQALRLIKLFEQQRELLASGVTAEEEGDVCPTCKAVLPEGQDT-----CAICPETKEAPP 163 PQAL L+ FEQQR + +GV V PE ++T +E PP Sbjct: 64 PQALHLLTEFEQQRHAIVTGVVP------------VRPEAEETQDDEDAEDGNAAEEQPP 111 Query: 164 STWALFRLSRFAKPYKGSLLLGFLLTLASTAATLVPPYMTMPLMDNVLIPFQNGAPIDTH 223 ST +LFRL RFAKPY+G LLLGFLLTLASTAATLVPPYMTMPLMDNVLIP+QNG PID Sbjct: 112 STASLFRLWRFAKPYRGQLLLGFLLTLASTAATLVPPYMTMPLMDNVLIPYQNGVPIDKG 171 Query: 224 LATLYLSGLLGAALLAWGLGWARTYILALVSERIGADLRTTTYAHLLRLSQEYFGGKRTG 283 L LYL GL G+AL AWGLGWARTYILALVSERIGADLRTTTY HLLRLS EYFGGKRTG Sbjct: 172 LVALYLGGLFGSALFAWGLGWARTYILALVSERIGADLRTTTYEHLLRLSLEYFGGKRTG 231 Query: 284 DLMARIGSETDRICVFLSLHLLDFAIDVLMIIMTAAILISINPWLALVTLLPLPFIAWMI 343 DLM RIGSETDRICVFLSLHLLDF DVLMI+MTAAILISINPWLALVTLLPLPFIAWMI Sbjct: 232 DLMTRIGSETDRICVFLSLHLLDFFTDVLMIMMTAAILISINPWLALVTLLPLPFIAWMI 291 Query: 344 HVVRDRLRHGFEKIDRIWSEVTNVLADTIPGIRVVKAFAQEKREVARFREANRHNLMVND 403 HVVRD+LR+GFEK+DRIWS+VTNVLADTIPGIRVVKAFAQEKRE ARFREAN HNL+VND Sbjct: 292 HVVRDKLRNGFEKVDRIWSQVTNVLADTIPGIRVVKAFAQEKREAARFREANNHNLVVND 351 Query: 404 RVNKIWSLFTPTVTFLTEVGLLVVWVFGIWQVSSNQITVGVLTAFLAYISRFYTRLDSMS 463 RVNK+WSLF+PTVTFLTE+GLLVVW GIWQVS ITVGVLTAFLAYISRFYTRLDSMS Sbjct: 352 RVNKVWSLFSPTVTFLTEIGLLVVWALGIWQVSQGMITVGVLTAFLAYISRFYTRLDSMS 411 Query: 464 RIVSVTQKAAAGAKRIFDILDHVSSVPEPANPVHLEKVEGAIEVRNIGFRYGNRAVIRNM 523 RIVSVTQKAA GAKRIFDILDHVSSVPE NPVHL+KV+G I +++IGFRYGNRAVIR + Sbjct: 412 RIVSVTQKAATGAKRIFDILDHVSSVPEATNPVHLDKVQGKITIKDIGFRYGNRAVIRGL 471 Query: 524 SLSIAPGEMIGLVGHSGSGKSTMVNLICRFYDVSEGAIRIDGVDIRSLPISEYRRNIGLV 583 L+I PGEMIGLVGHSGSGKST+VNLICRFYDVS GAI +DGVD+RS+PI EYRRNIGLV Sbjct: 472 DLTINPGEMIGLVGHSGSGKSTLVNLICRFYDVSAGAIMVDGVDVRSIPIPEYRRNIGLV 531 Query: 584 LQEPFLFFGTIAENIAYGKPEATREEIIAAARAAHAHEFILRLPQGYDSLVGERGQALSG 643 LQEPFLFFGTIA+NIAYGKP+A+RE+IIAAARAAHAHEFILRLP GYDS+VGERGQ LSG Sbjct: 532 LQEPFLFFGTIADNIAYGKPDASREDIIAAARAAHAHEFILRLPHGYDSMVGERGQTLSG 591 Query: 644 GERQRISIARALLIDPRILILDEATSSVDTTTEKEIQKALDNLVQGRTTIAIAHRLSTLR 703 GERQRISIARALLIDP ILILDEATSSVDTTTE+EIQKALDNLV+GRTTIAIAHRLSTLR Sbjct: 592 GERQRISIARALLIDPHILILDEATSSVDTTTEREIQKALDNLVRGRTTIAIAHRLSTLR 651 Query: 704 KADRLVVLDRGQVVEVGNHEELMAREGHYYKLYQAQARNPDGEAE 748 +ADR+VV+DRGQ+VEVG+H+EL+ REG YYKLYQAQ R + E Sbjct: 652 RADRIVVMDRGQIVEVGSHDELLQREGAYYKLYQAQQRQAEDMLE 696 >gi|152982656|ref|YP_001351943.1| ABC-type multidrug transport system, ATPase and permease components [Janthinobacterium sp. Marseille] Length = 658 Score = 330 bits (846), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 212/596 (35%), Positives = 344/596 (57%), Gaps = 14/596 (2%) Query: 168 LFRLSRFAKPYKGSLLLGFLLTLASTAATLVPPYMTMPLMD---NVLIPFQNGAPIDTHL 224 L RL+R A Y L L + L+ P + +D ++L+ + GA + + Sbjct: 52 LGRLTRLAVRYPWHCTFAILAALGAAVFNLLMPLLLGHAVDQAGHLLVNARLGADVVRN- 110 Query: 225 ATLYLSGLLGAALLAWG-LGWARTYILALVSERIGADLRTTTYAHLLRLSQEYFGGKRTG 283 A L GL+ G L + Y+ +++++G DLR Y L RLS Y TG Sbjct: 111 ALLVTGGLIVLVCAVRGILTGLQGYLGETLAQKVGYDLRMAFYEKLQRLSFSYHDKIHTG 170 Query: 284 DLMARIGSETDRICVFLSLHLLDFAIDVLMIIMTAAILISINPWLALVTLLPLPFIAWMI 343 DL+AR + + + FL +L L++ + + L+SI+ L L+ L +PF+AW Sbjct: 171 DLIARGMLDLEGVRAFLEFGVLRIITLTLLLGVGSWRLLSIDVTLGLLALSFVPFVAWNA 230 Query: 344 HVVRDRLRHGFEKIDRIWSEVTNVLADTIPGIRVVKAFAQEKREVARFREANRHNL-MVN 402 RLR ++++ ++ SE+T + + + G+RVV+AF E+++F + + L + N Sbjct: 231 ARTGLRLRVSWQRLQKMMSEMTLNMEENLQGVRVVRAFTSRLHEMSKFDKISDVALRLSN 290 Query: 403 DRVN-KIWSLFTPTVTFLTEVGLLVVWVFGIWQVSSNQITVGVLTAFLAYISRFYTRLDS 461 R+ ++ ++ + + T + L V+WV G +V+S +TVG LT FL +I+ L Sbjct: 291 QRITERMGNMSAMVLAYYTSMAL-VLWVGG-QRVASGALTVGSLTEFLTFITILQQPLRQ 348 Query: 462 MSRIVSVTQKAAAGAKRIFDILDHVSSVPEPANPVHLEKVEGAIEVRNIGFRYG----NR 517 + IV+ + +A R+F++LD + + N L+ +G + ++ F YG +R Sbjct: 349 IGMIVNASARATGSGARLFEVLDTDPEIKDAENAHDLKIDKGLLRFESVSFAYGHGPNDR 408 Query: 518 AVIRNMSLSIAPGEMIGLVGHSGSGKSTMVNLICRFYDVSEGAIRIDGVDIRSLPISEYR 577 V++++S + GE++G+VG GSGKST+ +LI RFY+VS G I IDG D+R+L +S R Sbjct: 409 TVLKDISFEVRKGEVLGIVGAPGSGKSTLAHLIPRFYEVSGGRITIDGQDLRALSLSSLR 468 Query: 578 RNIGLVLQEPFLFFGTIAENIAYGKPEATREEIIAAARAAHAHEFILRLPQGYDSLVGER 637 + LV QE FLF ++ N+AY +P+A E +I AA A HE + +LP+GY + VGER Sbjct: 469 SAVSLVQQENFLFDTSVHNNVAYPEPQAGEERVIEAASVAQIHEHVEQLPKGYTTRVGER 528 Query: 638 GQALSGGERQRISIARALLIDPRILILDEATSSVDTTTEKEIQKALDNLVQGRTTIAIAH 697 G ALSGG+RQR++IAR LL P IL+LD++T+++D TE+ ++ AL + ++ TI IAH Sbjct: 529 GVALSGGQRQRMTIARGLLDQPSILVLDDSTAAIDPATEQRVRAALQSSLKDTATIIIAH 588 Query: 698 RLSTLRKADRLVVLDRGQVVEVGNHEELMAREGHYYKLYQAQARNP-DGEAEVSVS 752 RLS+L+ AD+++VLD G++VE G H EL+A G Y +L+ Q R +G A +VS Sbjct: 589 RLSSLKHADQIIVLDEGRIVERGTHAELIAAGGRYAELWSLQNRGAQEGLAGSTVS 644 >gi|152981121|ref|YP_001351944.1| ABC-type multidrug transport system, ATPase and permease components [Janthinobacterium sp. Marseille] Length = 612 Score = 326 bits (835), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 192/502 (38%), Positives = 305/502 (60%), Gaps = 2/502 (0%) Query: 248 YILALVSERIGADLRTTTYAHLLRLSQEYFGGKRTGDLMARIGSETDRICVFLSLHLLDF 307 ++ A +++R+ DLR + HL +S + G LM+R+ + + + F+ + Sbjct: 103 WVAARLAQRVIFDLRRAMFNHLQHVSLSILDQTQVGRLMSRLQGDVNSLQEFMETSVSAV 162 Query: 308 AIDVLMIIMTAAILISINPWLALVTLLPLPFIAWMIHVVRDRLRHGFEKIDRIWSEVTNV 367 D +++ A+L+ ++ L L+TL LP + + + R F + S V Sbjct: 163 G-DFFLLLGIVAVLLLMDVKLGLLTLCVLPMMFLVRKIWLPWARKAFTRAREASSSVNAA 221 Query: 368 LADTIPGIRVVKAFAQEKREVARFREANRHNLMVNDRVNKIWSLFTPTVTFLTEVGLLVV 427 LA+ I GIR V+ +E AR+ NL ++ + PTV LT + + +V Sbjct: 222 LAENINGIRTVQENRREIVNFARYDVRAIENLQAQIGSSRASQVMMPTVDTLTGLAMAIV 281 Query: 428 WVFGIWQVSSNQITVGVLTAFLAYISRFYTRLDSMSRIVSVTQKAAAGAKRIFDILDHVS 487 V G QV S Q+ VGV+ AF+ + RF+ + +++ +V Q+A A RIF++LD Sbjct: 282 VVVGGSQVVSGQLDVGVMVAFIFCVQRFFDPIRTLTMQYTVMQRAMASGHRIFEVLDIEV 341 Query: 488 SVPEPANPVHLEKVEGAIEVRNIGFRYG-NRAVIRNMSLSIAPGEMIGLVGHSGSGKSTM 546 ++ + + L V AIE ++ F Y ++ V+ +++L I P + + LVG +GSGK+++ Sbjct: 342 TLSDKKDAQALADVPPAIEFNHVTFGYRPDQPVLHDLNLHIQPYQTVALVGPTGSGKTSI 401 Query: 547 VNLICRFYDVSEGAIRIDGVDIRSLPISEYRRNIGLVLQEPFLFFGTIAENIAYGKPEAT 606 LI RFYDV +G +++ G D+R L + + +G+VLQEPFLF GTIA+N+ YG AT Sbjct: 402 AALIHRFYDVWDGEVKVGGQDVRDLTLDSLGQCVGMVLQEPFLFSGTIADNMRYGLQWAT 461 Query: 607 REEIIAAARAAHAHEFILRLPQGYDSLVGERGQALSGGERQRISIARALLIDPRILILDE 666 RE++I AA+A AH+FI+RLP GYD+++G+RG+ LS G+RQ +S ARALL P+ILILDE Sbjct: 462 REQVIEAAKAVRAHDFIMRLPDGYDTMLGQRGRNLSIGQRQLLSFARALLAKPKILILDE 521 Query: 667 ATSSVDTTTEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVLDRGQVVEVGNHEELM 726 AT+++D+ TE EIQ+AL+ L +GRTTI IAHRL+T+R AD +VVL +G++VE G+H+EL+ Sbjct: 522 ATANIDSFTELEIQRALNVLRKGRTTIIIAHRLATIRDADVIVVLQKGRIVEKGSHDELL 581 Query: 727 AREGHYYKLYQAQARNPDGEAE 748 +G Y KL+ + + D E Sbjct: 582 KNKGLYAKLHASSNESFDDFVE 603 >gi|152981213|ref|YP_001352884.1| ABC-type multidrug transport system, ATPase and permease components [Janthinobacterium sp. Marseille] Length = 595 Score = 302 bits (774), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 209/596 (35%), Positives = 329/596 (55%), Gaps = 24/596 (4%) Query: 158 TKEAPPSTWALFR-LSRFAKPYKGSLLLGFLLTLASTAATLVPPYMTMPLMDNVLIPFQN 216 ++E + A R L +F PYK +L + + + AATL PY ++D + F Sbjct: 6 SRELQKGSIATLRGLLKFLLPYKKQFVLAGIALIVAAAATLAIPYAFRQMID---LGFGA 62 Query: 217 GAPIDTHLATLYLSGLLGAALLAWGLGWARTYILALVSERIGADLRTTTYAHLLRLSQEY 276 DT Y L G A + AR Y+++ + ER+ AD+R Y+H++ S ++ Sbjct: 63 NGMHDTSSINTYFIALFGVACVLAIATAARFYMVSWLGERVTADVRNAVYSHVVTQSPQF 122 Query: 277 FGGKRTGDLMARIGSETDRICVFLSLHL-------LDFAIDVLMIIMTAAILISINPWLA 329 F ++G++++RI ++T I + + L FA ++M+ T+ L SI L Sbjct: 123 FETTQSGEVLSRITTDTTLIQTLIGTSISMALRNALLFAGGLVMLFFTSIKLSSI--ILV 180 Query: 330 LVTLLPLPFIAWMIHVVRDRLRHGFEKIDRIWSEVTNVLADTIPGIRVVKAFAQEKREVA 389 + + LP I W VR R + DR+ ++ + + + + + V+A+ EK E Sbjct: 181 TLAFVVLP-IVWFGRRVRTLSR---DSQDRV-ADASALAGEILNAMPTVQAYTHEKIEAK 235 Query: 390 RFREANRHNLMVNDRVNKIWSLFTPTVTFLTEVGLLVVWVFGIWQVSSNQITVGVLTAFL 449 RF + + R + SL T L ++ V G V ++ G L F+ Sbjct: 236 RFGQTVENAFKTAMRRIRARSLLTMIAILLVFGAIVFVLWLGAHAVIDGSMSGGQLGQFI 295 Query: 450 AYISRFYTRLDSMSRIVSVTQKAAAGAKRIFDILDHVSSVPEPANPVHL--EKVEGA-IE 506 Y + + ++S ++ Q+AA +R+ ++L S + PA P L + GA + Sbjct: 296 LYSAIVAGAIGALSEVLGDAQRAAGATERLLELLSVQSPISSPATPRSLPPRRANGAALT 355 Query: 507 VRNIGFRYGNRAV---IRNMSLSIAPGEMIGLVGHSGSGKSTMVNLICRFYDVSEGAIRI 563 + + F Y +R + + N+S+SI GE + +VG SG+GK+++ L+ RFYD EG I + Sbjct: 356 LDLVTFHYPSRPLTPALSNLSVSIQAGETVAIVGPSGAGKTSLFQLLLRFYDPQEGVIEL 415 Query: 564 DGVDIRSLPISEYRRNIGLVLQEPFLFFGTIAENIAYGKPEATREEIIAAARAAHAHEFI 623 DG+DIR L + R IG+V Q+ +F ENI YG+PEAT EE+IAAAR A AHEFI Sbjct: 416 DGIDIRELDLHALRNTIGIVPQDTVIFSANAMENIRYGRPEATDEEVIAAARLAAAHEFI 475 Query: 624 LRLPQGYDSLVGERGQALSGGERQRISIARALLIDPRILILDEATSSVDTTTEKEIQKAL 683 RLP+GY S +GERG LSGG+RQRI+IARALL +P +L+LDEATS++D +E+ +Q AL Sbjct: 476 ERLPEGYLSFLGERGVRLSGGQRQRIAIARALLKNPPLLLLDEATSALDAESERLVQGAL 535 Query: 684 DNLVQGRTTIAIAHRLSTLRKADRLVVLDRGQVVEVGNHEELMAREGHYYKLYQAQ 739 + + GRTT+ IAHRL+T+++ADR++V++ G++VE G H L+A G Y L Q Sbjct: 536 EAAMVGRTTLVIAHRLATVQRADRIIVMEHGKIVETGTHASLVAAGGLYASLAALQ 591 >gi|152982174|ref|YP_001352225.1| ABC-type multidrug transport system, ATPase and permease components [Janthinobacterium sp. Marseille] Length = 578 Score = 293 bits (749), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 177/499 (35%), Positives = 275/499 (55%), Gaps = 6/499 (1%) Query: 244 WARTYILALVSERIGADLRTTTYAHLLRLSQEYFGGKRTGDLMARIGSETDRICVFLSLH 303 + TY++ VS R+ LR + +L + ++ G ++ + E +I ++ Sbjct: 77 FTTTYMMTWVSSRLLTTLRKQMFERMLDVPLGFYATHSVGRVINSMMFEVQQIIEMITKV 136 Query: 304 LLDFAIDVLMIIMTAAILISINPWLALVTLLPLPFIAWMIHVVRDRLRHGFEKIDRIWSE 363 D L +I+ + L +N L LV L+ LP IA ++ RLR + + E Sbjct: 137 YTSIIRDSLTVIVLLSFLFWLNWRLTLVALVLLPLIAIVVRATGRRLRRLTREYQTVNGE 196 Query: 364 VTNVLADTIPGIRVVKAFAQEKREVARFREANRHNLMVNDRVNKIWSLFTPTVTFLTEVG 423 +T V+ +T +V+K F + E RF R+ + TP + Sbjct: 197 MTQVIEETTRANQVIKIFGGHRYEEERFEVRADKLRGYTMRMATAMAATTPVTQVMASTA 256 Query: 424 LLVVWVFGIWQVSSNQITVGVLTAFLAYISRFYTRLDSMSRIVSVTQKAAAGAKRIFDIL 483 + +V V + Q NQ TVG +F+ + T L +++ + Q+ A+ +F ++ Sbjct: 257 VAIVIVIALIQSGQNQTTVGGFVSFITAMLMLLTPLKNIAEVNGPLQRGLTAAEAVFKLI 316 Query: 484 DHVSSVPEPANPVHLE-KVEGAIEVRNIGFRY-GNRAV-IRNMSLSIAPGEMIGLVGHSG 540 D + PE N L + G ++ +GF Y G + + +++++LS+ PGE I VG SG Sbjct: 317 D---AEPERTNGKDLAARAAGRLDFVRLGFTYPGQQTMALQDINLSVQPGETIAFVGMSG 373 Query: 541 SGKSTMVNLICRFYDVSEGAIRIDGVDIRSLPISEYRRNIGLVLQEPFLFFGTIAENIAY 600 GKST+VNL+ FY + G I++DGV I + +S R+ I +V Q LF TIA NIAY Sbjct: 374 GGKSTLVNLVPGFYSATAGEIQLDGVSIEEISLSSLRKQIAMVSQHVVLFDDTIAANIAY 433 Query: 601 GKPEATREEIIAAARAAHAHEFILRLPQGYDSLVGERGQALSGGERQRISIARALLIDPR 660 G R I+AAA AAH E I LP+G ++++G+ G LSGG+RQR++IARA+ D Sbjct: 434 GDANPDRTRIMAAAHAAHLDEVIAGLPEGLETMIGDNGSRLSGGQRQRLAIARAIYKDAP 493 Query: 661 ILILDEATSSVDTTTEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVLDRGQVVEVG 720 ILILDEATS++D+ +E+ +Q ALD L++GRTT+ IAHRLST+ +ADR+ VL G +VE+G Sbjct: 494 ILILDEATSALDSESERAVQAALDELMKGRTTLVIAHRLSTIERADRIAVLAEGHIVELG 553 Query: 721 NHEELMAREGHYYKLYQAQ 739 +H+EL+AR G Y LY Q Sbjct: 554 SHQELLARNGVYANLYHLQ 572 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.322 0.137 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,633,973 Number of extensions: 63650 Number of successful extensions: 415 Number of sequences better than 1.0e-08: 61 Number of HSP's gapped: 329 Number of HSP's successfully gapped: 63 Length of query: 758 Length of database: 1,221,021 Length adjustment: 90 Effective length of query: 668 Effective length of database: 888,291 Effective search space: 593378388 Effective search space used: 593378388 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)