BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2024.p (732 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981863|ref|YP_001355245.1| cyanophycin synthetase [Janthin... 897 0.0 gi|152981679|ref|YP_001355246.1| cyanophycin synthetase [Janthin... 556 e-159 >gi|152981863|ref|YP_001355245.1| cyanophycin synthetase [Janthinobacterium sp. Marseille] Length = 722 Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/723 (63%), Positives = 568/723 (78%), Gaps = 12/723 (1%) Query: 2 KNIEFLRFLNLKGPNIWTYRSALEVWIDIGELEDFPSNTIAGFPDRLTAWLPTLIEHRCS 61 K I+ + L+L+GPNIWTYR LE W+DIGELEDFPSNTI GF +RLTAWLP+L+EH C Sbjct: 4 KTIDIIDVLSLRGPNIWTYRPVLEAWVDIGELEDFPSNTIPGFYERLTAWLPSLVEHHCG 63 Query: 62 YEERGGFVRRLHEGTWPGHILEHVTLELQNLAGLPGGFGKARETNVRGVYKVVVRARHET 121 GGF+ RL EGTWPGHI+EHV +ELQNLAG+ GFGKARET+ RGVYKVVVRARHE Sbjct: 64 VGVHGGFLMRLREGTWPGHIMEHVMIELQNLAGMQSGFGKARETSKRGVYKVVVRARHEE 123 Query: 122 VTRAALFAARDLVMAAIEDRPYDLDTTLRKLRRMVDRLCLGPSTACIVDAADERRIPTIR 181 V+RAAL AARDLVMAAI+D+P+D+ + LR +++ + LGPST CIVDAA +RRIP++R Sbjct: 124 VSRAALVAARDLVMAAIQDKPFDVKGAVDNLRDILESVALGPSTGCIVDAATDRRIPSMR 183 Query: 182 LSEGNLVQLGHGCKSRRIWTAESDQTGAIAEGISRDKDLTKSLLQTCGVPVPEGRLVDSP 241 L+EGNLVQLG+G + RRIWTAE+DQT AIAE IS DK+LTK+LLQ+CGVPVPEGR+V+S Sbjct: 184 LNEGNLVQLGYGARQRRIWTAETDQTSAIAETISSDKELTKTLLQSCGVPVPEGRIVNSV 243 Query: 242 EDAWEAAQDIGLPVVVKPCDANHGRGVFIDLNTREEIETAFKVALEEGSGVLVERFIPGL 301 DAW+AA+ IGLPVV+KP D NHGRGV +LN +++IE AF +A +E S V+VERF+ G Sbjct: 244 ADAWDAAESIGLPVVIKPLDGNHGRGVSTNLNNQKDIEAAFLLAEQESSDVIVERFVRGN 303 Query: 302 EHRLLIVGGKLAAAARGEPIFIVGDGQSTVQDLLD-ELNRDPRRGLLEEHLLDPVLLDR- 359 EHRLLI+GG+L AAARGE IV DG ST+ +L++ +LN DPRRG E+ L+ +L+D Sbjct: 304 EHRLLIIGGRLVAAARGEEASIVSDGVSTISELINSQLNSDPRRGSSEDCPLNLILIDEA 363 Query: 360 -EP-AAALELQRQNLTTESVPAAGRRILLLRNGNVSSDITDLVHPSVAAAASLAVRIVGL 417 +P LEL RQ TTES+P AG +IL+ RNGNV+ D+TD VHPSVAAAASLA RIVGL Sbjct: 364 DDPRVVLLELARQGYTTESIPPAGEKILVQRNGNVAFDVTDQVHPSVAAAASLAARIVGL 423 Query: 418 DIAGVDIVAEDISRPLQEQGGAIVEVNAGPGLLMHLKPSDGKPRPVGEAIIDNLFGPEEN 477 DIAGVD+VAEDISRPL+EQGGAIVEVNAGPGLLMHLKP+DG RPVG AI+D+LF ++N Sbjct: 424 DIAGVDLVAEDISRPLEEQGGAIVEVNAGPGLLMHLKPADGPARPVGRAIVDHLFAEDQN 483 Query: 478 GRIPVVGVTGTHGKTTIARLIARIVHLSGKHVGLACGEGLYFGERQIERGNRATWDAAHR 537 GRIP+VGVTG+HG T ++RLIA ++HL GK+VGLAC +GL+ +R + + W A + Sbjct: 484 GRIPIVGVTGSHGSTVVSRLIAWLLHLQGKYVGLACRDGLFLRQRHVLQKESDNWQATRQ 543 Query: 538 VLLNRAVEAAVFENGSAAILSEGLAYDRCLVGVVANIDPNDSLPEFYIENAEQIATKVKR 597 VLLNR VEAAVFEN S AILSEGLAYD C VGVV NIDP D LPEFYIE+A+Q+ TKV R Sbjct: 544 VLLNRMVEAAVFENSSKAILSEGLAYDWCQVGVVTNIDPTDKLPEFYIEDADQM-TKVAR 602 Query: 598 TQVDLVLPDGAAVLNADDPLVADMAQLCDGEVIFFSTDPASELLASHLKDGGRAVFLRDG 657 TQVD+VLPDG AVLNA D VA+ A LCDG VIFF+ P++ ++ +H +GGR+VF+RDG Sbjct: 603 TQVDIVLPDGVAVLNAADARVAEFASLCDGSVIFFAASPSTPVIVAHQAEGGRSVFVRDG 662 Query: 658 DLIQAEGERQCKVSSVDAIPLTENGAVAYQVENVLAAVGAAWALGIGPEVIRAGIELFGT 717 +++ A G+ + VS+ +EN LAA+ AAWALGI P++++AGIE F + Sbjct: 663 NIVLATGKEEVLVSAAQE-------RADLSIENSLAAIAAAWALGISPDLMKAGIETFES 715 Query: 718 ERA 720 A Sbjct: 716 TDA 718 >gi|152981679|ref|YP_001355246.1| cyanophycin synthetase [Janthinobacterium sp. Marseille] Length = 853 Score = 556 bits (1432), Expect = e-159, Method: Compositional matrix adjust. Identities = 318/718 (44%), Positives = 441/718 (61%), Gaps = 23/718 (3%) Query: 4 IEFLRFLNLKGPNIWTYRSALEVWIDIGELEDFPSNTIAGFPDRLTAWLPTLIEHRCSYE 63 +E R L+GPN+W+ +++E + +E I GF DRL A P + Sbjct: 1 MEISRVRALRGPNLWSRHTSIEAIVSCNGIEQ-TILAIPGFEDRLRARFPEI-------- 51 Query: 64 ERGGFVRRLHEGTWPGHILEHVTLELQNLAGLPGGFGKARETNVRGVYKVVVRARHETVT 123 F+ H+LE + LQ AG P F + +T G+Y+VVV E V Sbjct: 52 ---KFLEPAETTFSMAHVLESAAIGLQAQAGCPVTFSRTIQTVEPGIYQVVVEYTEEAVG 108 Query: 124 RAALFAARDLVMAAIEDRPYDLDTTLRKLRRMVDRLCLGPSTACIVDAADERRIPTIRLS 183 R A A++L AA ED P+DL T L LR + + + LGPST IVDAA R IP RL+ Sbjct: 109 RLAFELAQNLCRAATEDTPFDLATALASLRELDEDIRLGPSTGSIVDAAVARGIPFRRLT 168 Query: 184 EGNLVQLGHGCKSRRIWTAESDQTGAIAEGISRDKDLTKSLLQTCGVPVPEGRLVDSPED 243 EG++VQ G G + +RI AE+ T AIAE I++DK++TK LL GVPVP+G V + E+ Sbjct: 169 EGSMVQFGWGSRQKRIQAAETGFTSAIAESIAQDKEMTKVLLAAAGVPVPDGASVTTAEE 228 Query: 244 AWEAAQDIGLPVVVKPCDANHGRGVFIDLNTREEIETAFKVALEEGSGVLVERFIPGLEH 303 AW+AA+DIG PVV+KP D N G+GV +++ T EE++TAF VA E S V+VER++PG ++ Sbjct: 229 AWQAARDIGAPVVIKPRDGNQGKGVAVNMKTEEEVKTAFAVAYEICSDVVVERYLPGHDY 288 Query: 304 RLLIVGGKLAAAARGEPIFIVGDGQSTVQDLLDELNRDPRRGLLEEHLLDPVLLDREPAA 363 RLL+VG +L AAAR P ++GDG T++ L+D++N DP RG L + +D A Sbjct: 289 RLLVVGKQLIAAARRAPPEVLGDGVQTIRQLIDQVNLDPLRGDGHASPLTKIKVDNLTLA 348 Query: 364 ALELQRQNLTTESVPAAGRRILLLRNGNVS-----SDITDLVHPSVAAAASLAVRIVGLD 418 L + N T ESVP G +++L N N+S +D+TD VHP +AA A A +++GLD Sbjct: 349 T--LAKINYTLESVPPKGVQVVLRNNANLSTGGTATDVTDDVHPDLAARAVEAAQMIGLD 406 Query: 419 IAGVDIVAEDISRPLQEQGGAIVEVNAGPGLLMHLKPSDGKPRPVGEAIIDNLFGPEENG 478 I G+D+V E + + L+EQGG +VEVNA PGL MH+KPS GK RPVGEAII +F ++G Sbjct: 407 ICGIDLVCESVLKTLEEQGGGVVEVNAAPGLRMHIKPSFGKGRPVGEAIISTMFDEGDDG 466 Query: 479 RIPVVGVTGTHGKTTIARLIARIVHLSGKHVGLACGEGLYFGERQIERGNRATWDAAHRV 538 RIPVV V GT+GKTT RLIA I+ + VG+ +G+Y ++I+ G+ + +A V Sbjct: 467 RIPVVAVAGTNGKTTTVRLIAHILQGNKYRVGMTSTDGVYIENKRIDTGDCSGPRSARNV 526 Query: 539 LLNRAVEAAVFENGSAAILSEGLAYDRCLVGVVANIDPNDSLPEFYIENAEQIATKVKRT 598 L++ V+AAV E +L EGL +DRC V VV NI D L +I E +A VKR Sbjct: 527 LMHPDVDAAVLETARGGVLREGLGFDRCNVAVVTNIGVGDHLGLNFISTVEDLAV-VKRV 585 Query: 599 QVDLVLPDGAAVLNADDPLVADMAQLCDGEVIFFSTDPASELLASHLKDGGRAVFLRDGD 658 V V P+G AVLNA DP+VA+MA C G V FF+ D +LA+H G R +F +DG+ Sbjct: 586 IVQNVAPNGTAVLNAADPMVANMAGSCPGSVTFFAQDSNHAVLATHRAQGHRVLF-QDGN 644 Query: 659 LI-QAEGERQCKVSSVDAIPLTENGAVAYQVENVLAAVGAAWALGIGPEVIRAGIELF 715 +I +EG+ + ++ D IP+T NG V +QVEN +AA+GAAW LG+ V+ G+ F Sbjct: 645 VIVLSEGKFEHRIQLSD-IPITHNGTVGFQVENAMAAIGAAWGLGLDWNVVLEGLRTF 701 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.319 0.138 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,703,001 Number of extensions: 73578 Number of successful extensions: 271 Number of sequences better than 1.0e-08: 2 Number of HSP's gapped: 260 Number of HSP's successfully gapped: 2 Length of query: 732 Length of database: 1,221,021 Length adjustment: 90 Effective length of query: 642 Effective length of database: 888,291 Effective search space: 570282822 Effective search space used: 570282822 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)