BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.2021.p
         (296 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980167|ref|YP_001353754.1| UTP--glucose-1-phosphate uridyl...   495   e-141
gi|152979925|ref|YP_001352335.1| mannose-1-phosphate guanylyltra...    66   2e-12

>gi|152980167|ref|YP_001353754.1| UTP--glucose-1-phosphate
           uridylyltransferase [Janthinobacterium sp. Marseille]
          Length = 291

 Score =  495 bits (1275), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 233/287 (81%), Positives = 263/287 (91%)

Query: 2   IKKIKKAVFPVAGLGSRFLPATKAQPKEMLPIVDKPLIHYAVEEAVAAGITEMVFITGRN 61
           + KI+KAVFPVAGLGSRFLPATKAQPKEMLP+VDKPLI YAVEEAVAAGIT+MVFITGRN
Sbjct: 1   MSKIRKAVFPVAGLGSRFLPATKAQPKEMLPVVDKPLIQYAVEEAVAAGITDMVFITGRN 60

Query: 62  KRAIEDHFDKAYELESELEAAGKQKLLDIVRNVVPKSVNCIFIRQSEPLGLGHAVLCARP 121
           KRAIEDHFD AYELE+ELEAA K  LL++VRNV+PK++NCI+IRQS PLGLGHAVLCARP
Sbjct: 61  KRAIEDHFDTAYELEAELEAANKNALLELVRNVIPKNINCIYIRQSAPLGLGHAVLCARP 120

Query: 122 VVGEEPFAILLADDFMDTDPGVKPVMAQMTDIYAREGMSMLAVQEVPKSDTRQYGIVSAT 181
           V+G +PFA+LLADDFMDTD GVKPV+AQMTD++ REG S+LAVQ+VP+++T+QYGIVSAT
Sbjct: 121 VIGNDPFAVLLADDFMDTDEGVKPVLAQMTDVFQREGHSILAVQDVPRAETKQYGIVSAT 180

Query: 182 PYQPDLERINAIVEKPAPEEAPSTLAVVGRYVLNSRIFHYLENIPRGAGGEIQLTDGIAK 241
            YQP LE +NAIVEKP P+ APSTLAVVGRYVL+++IF YLE I +GAGGEIQLTDGIA 
Sbjct: 181 AYQPQLELVNAIVEKPQPDVAPSTLAVVGRYVLSNKIFDYLETIGKGAGGEIQLTDGIAA 240

Query: 242 LMQAESVLAYRYQGQRYDCGSKLGYLKAMVAMGLKHPETGPAFSEYL 288
           LMQAE VLAYRY GQRYDCGSKLGYLKAMVAMGLKHPETG  F+EYL
Sbjct: 241 LMQAEKVLAYRYNGQRYDCGSKLGYLKAMVAMGLKHPETGAGFTEYL 287


>gi|152979925|ref|YP_001352335.1| mannose-1-phosphate
           guanylyltransferase [Janthinobacterium sp. Marseille]
          Length = 385

 Score = 66.2 bits (160), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 25/216 (11%)

Query: 7   KAVFPVAGLGSRFLPATKAQPKEMLPIVDKPLIHYAVEEAVAAGITEMVFITGRNKRAIE 66
           KA+   AG G+R  P T   PK M+PI+ KP++ Y VE  V  GI E++       + IE
Sbjct: 2   KAMILAAGKGTRVQPLTYELPKPMIPILGKPVMEYLVEHLVKYGIHEIMVNVSYLHQKIE 61

Query: 67  DHFDKAYELESELEAAGKQKLLDIVRNVVPKSVNCIFIRQSEPLGLGHAVLCARPVVG-- 124
           D+F +     +++  + +  + D    V+PK           P+G    +   +   G  
Sbjct: 62  DYFGEGQRFGAQIGYSFEGYMTD-EGEVMPK-----------PIGSAGGLKKIQEFGGFF 109

Query: 125 EEPFAILLADDFMDTDPGVKPVMAQMTDIYAREG-MSMLAVQEVPKSDTRQYGIVSATPY 183
           +E   ++  D  +D D  +K  + +    + R+G M  +  +EVP      YG+V     
Sbjct: 110 DETTLVICGDALIDLD--IKSALFE----HRRKGAMVSIITKEVPLEKASDYGMVVTD-- 161

Query: 184 QPDLERINAIVEKPAPEEAPSTLAVVGRYVLNSRIF 219
             +  R+ +  EKP PE+A S LA  G Y+    + 
Sbjct: 162 --EEGRVLSFQEKPKPEDALSNLASTGIYIFEPEVL 195


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.136    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 697,550
Number of extensions: 29039
Number of successful extensions: 87
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 2
Length of query: 296
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 213
Effective length of database: 914,170
Effective search space: 194718210
Effective search space used: 194718210
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 129 (54.3 bits)