BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.2011.p (660 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981021|ref|YP_001353764.1| ABC transporter ATPase [Janthin... 1030 0.0 gi|152980982|ref|YP_001353691.1| ABC transporter ATPase [Janthin... 278 8e-76 gi|152980787|ref|YP_001354212.1| ATP-binding ABC transporter pro... 253 2e-68 gi|152981164|ref|YP_001355224.1| putative ABC transporter ATP-bi... 210 2e-55 gi|152982367|ref|YP_001352417.1| iron(III) ABC-type transport sy... 79 1e-15 >gi|152981021|ref|YP_001353764.1| ABC transporter ATPase [Janthinobacterium sp. Marseille] Length = 657 Score = 1030 bits (2663), Expect = 0.0, Method: Compositional matrix adjust. Identities = 504/657 (76%), Positives = 574/657 (87%), Gaps = 8/657 (1%) Query: 11 RGVKPLLENVDLTLNPGDKIGLIGANGAGKSSLFAMLRGELHPDLGNIDYPARWRMAYVA 70 RG+KPLL+NVD+TLNPGDKIGLIGANGAGKSSLF +LRGELH DLG ID+P++WR+AYVA Sbjct: 2 RGIKPLLDNVDVTLNPGDKIGLIGANGAGKSSLFGLLRGELHADLGTIDFPSKWRVAYVA 61 Query: 71 QETPALDRPAIEYAIDGDAHLRQLEAELARAEAQPDDKHDGNHVAELHTALADADAYTVR 130 QETP L+R AI+YAIDGD LR+LE ELA E++PD +G + EL++ALADADAYTVR Sbjct: 62 QETPPLERSAIDYAIDGDVTLRRLEEELAFLESEPDTLDNGVLIGELYSALADADAYTVR 121 Query: 131 SRAEQLLLGLGFSLEQMERPVASFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAII 190 SRAEQLLLGLGF++ QM++PVASFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAII Sbjct: 122 SRAEQLLLGLGFTMAQMDQPVASFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAII 181 Query: 191 WLEDWLKRYEGTLLIISHDRDFLDGVVNVIVHIDDRKLKRYSGNYSAFERQRSAQLELMA 250 WLEDWLKRY GTL++ISHDRDFLDGVVNVIVHID+RKLKRYSGNYS FERQR+AQ+ L Sbjct: 182 WLEDWLKRYAGTLIVISHDRDFLDGVVNVIVHIDERKLKRYSGNYSGFERQRAAQMILAQ 241 Query: 251 GMIEKQQRQRAHLQSFIDRFKAKATKARQAQSRMKALSKMEELAPLRAAAEFSFEFREPL 310 +EKQ RQRAHL+SFI+RFKA+A+KARQAQSRMKALSKMEELAPLRAAAEFSFEFREP Sbjct: 242 SAMEKQARQRAHLESFINRFKAQASKARQAQSRMKALSKMEELAPLRAAAEFSFEFREPA 301 Query: 311 SAPNPLLVMEKVNAGYHIEGKNGAPDADKIIVHGIDFSLQNGQRIGLLGVNGAGKSTLIK 370 +APNPLLVME V+AGY IE + +K IV GI+FSLQ GQRIGLLGVNGAGKSTLIK Sbjct: 302 NAPNPLLVMEDVDAGYRIEDEKDYSITEKKIVSGINFSLQIGQRIGLLGVNGAGKSTLIK 361 Query: 371 TVAGEIDPLSGTARLGKGLVIGYFAQHQVEMLRHDESPLWHLTRLAPDVREQELRNFLGS 430 T+AGE++PL+G+++ GKGL IGYFAQHQVEMLRH+ESPLWHL +AP VREQELRNFLGS Sbjct: 362 TIAGELEPLNGSSQFGKGLAIGYFAQHQVEMLRHEESPLWHLAHIAPTVREQELRNFLGS 421 Query: 431 FNFNGTMATSSIAPFSGGEKARLALALIVWQRPNLLLLDEPTNHLDLETREALTMALAQF 490 FNFNG M TS IAPFSGGEKARLALALIVWQRPNLLLLDEPTNHLDLETREALTMALAQF Sbjct: 422 FNFNGAMVTSKIAPFSGGEKARLALALIVWQRPNLLLLDEPTNHLDLETREALTMALAQF 481 Query: 491 EGTLVLVSHDRHLLRATTDQFLIVAEGKLQPFDGDLDDYKDWLFKTKLAARNDAAAAAPL 550 EGTLV+VSHDRHLLRATTDQF+IVA+GKLQPFDGDLDDYKDWLFKTKLAA+N AA+ A L Sbjct: 482 EGTLVVVSHDRHLLRATTDQFIIVADGKLQPFDGDLDDYKDWLFKTKLAAKN-AASNATL 540 Query: 551 PTSSQP-------VEAAPASLVDRKEQKRLEAEQRQKMSALKKPIEARIKRLDEQIAKLN 603 P ++ A S VD++EQK+ EAE+RQK++A KKPIE +IK+L+EQIAK N Sbjct: 541 PPVAEKSASPVAPAPVAAVSAVDKREQKKQEAEERQKLAARKKPIELKIKKLEEQIAKRN 600 Query: 604 VRKGEIDARLASPDIYDAANKDELKTLITDQAYCSKELEQLENEWLEQQEALEQLQA 660 +K +D +LA P IYDAANK ELK L+ DQ + +KE+ QLE EWLEQQEALEQ+ + Sbjct: 601 AQKASVDEKLADPLIYDAANKKELKQLLADQTFYTKEITQLEAEWLEQQEALEQVNS 657 >gi|152980982|ref|YP_001353691.1| ABC transporter ATPase [Janthinobacterium sp. Marseille] Length = 508 Score = 278 bits (711), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 178/516 (34%), Positives = 271/516 (52%), Gaps = 29/516 (5%) Query: 27 GDKIGLIGANGAGKSSLFAMLRGELHPDLGNIDYPARWRMAYVAQETPALDR-PAIEYAI 85 G++ GLIGANG GKS+ +L G+L P G + R+ + Q+ A + ++ + Sbjct: 2 GNRYGLIGANGCGKSTFMKILGGDLDPSAGTVMLDPNERLGKLRQDQFAFEEMRVLDVVM 61 Query: 86 DGDAHLRQLEAELARAEAQPDDKHDGN-HVAELHTALADADAYTVRSRAEQLLLGLGFSL 144 G + AE A PD D A+L A+ D YT SRA +LLLG G ++ Sbjct: 62 MGHTEMWAAMAERDAIYANPDATDDDYMKAADLEAKFAEYDGYTAESRAGELLLGAGVAI 121 Query: 145 EQMERPVASFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAIIWLEDWLKRYEGTLL 204 + + P+++ S GW++R+ LAQAL D+LLLDEPTN+LD++ I WLED L T++ Sbjct: 122 DLHQGPMSNVSPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMI 181 Query: 205 IISHDRDFLDGVVNVIVHIDDRKLKRYSGNYSAF----ERQRSAQLELMAGMIEKQQRQR 260 IISHDR FL+ V + +D LK Y GNY + + R+ QL A K + + Sbjct: 182 IISHDRHFLNQVCTHVADMDYGTLKIYPGNYDDYMFASTQARNQQLANNA----KAKDKV 237 Query: 261 AHLQSFIDRFKAKATKARQAQSRMKALSKMEELAPLRAAAEFSFEFREPLSAPNPLLVM- 319 A LQ F+ RF A +KARQA SR K + K++ + +P S P + Sbjct: 238 AELQEFVRRFAANKSKARQATSRAKQIEKIK------------VDDIKPSSRAYPFVRFD 285 Query: 320 -EKVNAGYHIEGKNGAPDADKIIVHGIDFSLQNGQRIGLLGVNGAGKSTLIKTVAGE-ID 377 EK +E + + D+ + ++ G+RI ++G NGAGK+TL++ + GE I Sbjct: 286 GEKKLHRLAVEAETISKAFDRQLFKNFSIMVEAGERIAIIGANGAGKTTLLRCIGGEDIS 345 Query: 378 PLS---GTARLGKGLVIGYFAQHQVEMLRHDESPL-WHLTRLAPDVREQELRNFLGSFNF 433 LS G + + +GY Q E D++ W +Q +R+ LG F Sbjct: 346 GLSADQGRVKWAENANVGYMPQDPTEDFASDKNLTDWMGQWTQEGDDDQAVRSILGRLLF 405 Query: 434 NGTMATSSIAPFSGGEKARLALALIVWQRPNLLLLDEPTNHLDLETREALTMALAQFEGT 493 G S+ SGGEK R+ ++ R N+LL+DEPTNH+D+E+ E+L +AL ++ GT Sbjct: 406 GGDDVKKSVKVLSGGEKGRMTYGKLMLGRHNVLLMDEPTNHMDMESIESLNIALEKYAGT 465 Query: 494 LVLVSHDRHLLRATTDQFLIVAEGKLQPFDGDLDDY 529 L+ VSHDR + + + L V +G++ F G ++Y Sbjct: 466 LIFVSHDREFVSSLATRVLEVKDGEIIDFQGTYEEY 501 Score = 96.7 bits (239), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 113/229 (49%), Gaps = 37/229 (16%) Query: 14 KPLLENVDLTLNPGDKIGLIGANGAGKSSLFAMLRGE----LHPDLGNIDYPARWRMAYV 69 + L +N + + G++I +IGANGAGK++L + GE L D G + + + Y+ Sbjct: 306 RQLFKNFSIMVEAGERIAIIGANGAGKTTLLRCIGGEDISGLSADQGRVKWAENANVGYM 365 Query: 70 AQETPALDRPAIEYAIDGDAHLRQLEAELARAEAQPDDKHDGNHVAELHTALADADAYTV 129 Q+ P ++A D + L + + + DD V Sbjct: 366 PQD------PTEDFASD-----KNLTDWMGQWTQEGDDDQ------------------AV 396 Query: 130 RSRAEQLLLGLGFSLEQMERPVASFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAI 189 RS +LL F + +++ V SGG + R+ + ++ ++LL+DEPTNH+D+++I Sbjct: 397 RSILGRLL----FGGDDVKKSVKVLSGGEKGRMTYGKLMLGRHNVLLMDEPTNHMDMESI 452 Query: 190 IWLEDWLKRYEGTLLIISHDRDFLDGVVNVIVHIDDRKLKRYSGNYSAF 238 L L++Y GTL+ +SHDR+F+ + ++ + D ++ + G Y + Sbjct: 453 ESLNIALEKYAGTLIFVSHDREFVSSLATRVLEVKDGEIIDFQGTYEEY 501 >gi|152980787|ref|YP_001354212.1| ATP-binding ABC transporter protein [Janthinobacterium sp. Marseille] Length = 636 Score = 253 bits (646), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 212/679 (31%), Positives = 338/679 (49%), Gaps = 72/679 (10%) Query: 1 MIRFQQVSLQRGVKPLLENVDLTLNPGDKIGLIGANGAGKSSLFAMLRGELHPDLGNIDY 60 +I L G PLL++ + +L +++GLIG NG GKSSL ++ G D G Sbjct: 3 VISLSNAQLAFGHVPLLDHAEFSLETTERVGLIGRNGTGKSSLLKIIAGRSKLDDGLFVM 62 Query: 61 PARWRMAYVAQE---TPALDRPAIEYAIDGDAHLRQLEAELARAEAQPDDKHDG---NHV 114 ++AYV QE +P + + G ++ L AE Q +D + Sbjct: 63 QQGIKIAYVEQEPHFSPEM--SVFDAVASGMGDMQALLAEYDALTGQFGGDNDDALMERM 120 Query: 115 AELHTALADADAYTVRSRAEQLLLGLGFSLEQMERPVASFSGGWRMRLNLAQALMCPSDL 174 E+ L ADA+ + ++ E L L + + + + SGG + R+ LA AL+ D+ Sbjct: 121 HEIQLKLDAADAWNLTNKVEATLDRLNLVKDAL---MGTLSGGMQKRVALACALVSAPDV 177 Query: 175 LLLDEPTNHLDLDAIIWLEDWLKRYEGTLLIISHDRDFLDGVVNVIVHIDDRKLKRYSGN 234 LLLDEPTNHLD +I+WLE L+ Y+G++L I+HDR FLD V I+ +D +L + GN Sbjct: 178 LLLDEPTNHLDFTSILWLEGLLRDYKGSVLFITHDRSFLDNVATRIIELDRGRLLSFPGN 237 Query: 235 YSAFERQRSAQLELMAGMIEKQQRQRAHLQSFIDR---FKAKATKARQAQSRMKALSKME 291 +SA++ +++ QLE+ ++ + A F+ + + K +AR+ + + + ++E Sbjct: 238 FSAYQVRKAEQLEI-------EEVENAKFDKFLAQEEIWIRKGVQARRTRDEGR-VRRLE 289 Query: 292 ELAPLRAA-----AEFSFEFREPLSAPNPLLVMEKVNAGYHIEGKNGAPDADKIIVHGID 346 L R+A + + + + +E +N Y DK+IV Sbjct: 290 ALRLTRSARREQQGQVKLDVSSGDRSGKIVAELENINKTY----------GDKVIVRDFS 339 Query: 347 FSLQNGQRIGLLGVNGAGKSTLIKTVAGEIDPLSGTARLGKGLVIGYFAQHQVEMLRHDE 406 +L G +IGL+G+NGAGK+TL+K + GE +P SGT + G L I YF Q + ++ ++E Sbjct: 340 ATLLRGDKIGLIGLNGAGKTTLLKMILGEEEPDSGTVKQGTKLQIAYFDQMRAQL--NEE 397 Query: 407 SPLWHLTRLAPDVRE-----QELRNFLGSFNFNGTMATSSIAPFSGGEKARLALALIVWQ 461 + L D E + + +L F F A S + SGGE+ RL LA + + Sbjct: 398 ASLADTIAPGSDWVEINGQRKHVMTYLNDFLFAPERARSPVKSLSGGERNRLLLARLFAK 457 Query: 462 RPNLLLLDEPTNHLDLETREALTMALAQFEGTLVLVSHDRHLLRATTDQFLIVAEGK--L 519 N+L+LDEPTN LD++T E L L ++GT+ LVSHDR L Q +IVAEG Sbjct: 458 PANVLVLDEPTNDLDIDTLELLEELLEDYKGTVFLVSHDRTFLDNVVTQ-VIVAEGNGLW 516 Query: 520 QPFDGDLDDYKDWLFKTKLAARNDAAAAAPLPTSSQPV--EAAPASLVDRKEQKRLEAEQ 577 + + G Y DW + + AA A +P P + V E A + +QK+L ++ Sbjct: 517 REYIG---GYSDW-ERVRPAA---IPAGSPKPAAKAEVKAEVATEAAAPVAKQKKLSYKE 569 Query: 578 RQKMSALKKPIEARIKRLDEQIAKLNVRKGEIDARLASPDIYDAANKDELKTLITDQAYC 637 +++M AL IA+L + I +LA +Y DE+K L +Q + Sbjct: 570 QREMDALPA-----------LIAQLEDEQKAITEKLADASLY-TKQPDEVKRL--NQRFT 615 Query: 638 SKELEQLENEWLEQQEALE 656 E++ L E LE+ E +E Sbjct: 616 --EIDGLLLEALEKWEEIE 632 >gi|152981164|ref|YP_001355224.1| putative ABC transporter ATP-binding protein [Janthinobacterium sp. Marseille] Length = 555 Score = 210 bits (535), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 160/532 (30%), Positives = 262/532 (49%), Gaps = 38/532 (7%) Query: 16 LLENVDLTLNPGDKIGLIGANGAGKSSLFAMLRGELHPDLGNIDYPARWRMAYVAQETPA 75 +L+++ L+ PG KIG++G NG+GKS+L ++ G +G + Y+ QE P Sbjct: 21 ILKDISLSFFPGAKIGVLGLNGSGKSTLLKIMAGIDTDIIGEARPAPNLNIGYLPQE-PQ 79 Query: 76 LD-----RPAIEYAIDGDAHLRQLEAELARAEAQPDDKHDGNHVAELHTALADADAYTVR 130 LD R A+E + + E+ A A+PD D L T A +A Sbjct: 80 LDPEQTVRQAVEGGLGEVFEAKAKLEEVYAAYAEPDADFDA-----LATEQARLEAIIST 134 Query: 131 SRAEQLLLGLGFSLEQMERP-----VASFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLD 185 S + L + + + P + SGG + R+ L + L+ D+LLLDEPTNHLD Sbjct: 135 SAGDNPEQQLEMAADALRLPPWDAKIGVLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLD 194 Query: 186 LDAIIWLEDWLKRYEGTLLIISHDRDFLDGVVNVIVHIDDRKLKRYSGNYSAFERQRSAQ 245 +++ WLE +L+R+ GT++ I+HDR FLD I+ +D + GNYS++ Q+ + Sbjct: 195 AESVDWLEQFLQRFPGTVVAITHDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKGDR 254 Query: 246 LELMAGMIEKQQRQRAHLQSFIDRFKAKATKARQAQSRMKALSKMEELAPLRAAAEFSFE 305 L+ +Q+ A ++ + K RQA+S+ + L++ EL+ E Sbjct: 255 LKQEEASESSRQKTIAKELEWV----RQNPKGRQAKSKAR-LARFNELS--------EHE 301 Query: 306 FREPLSAPNPLLVMEKVNAGYHIEGKNGAPD-ADKIIVHGIDFSLQNGQRIGLLGVNGAG 364 +++ + + + IE KN + D++++ + F + G +G++G NGAG Sbjct: 302 YQKRNETQEIFIPVAERLGNEVIEFKNVSKAFGDRLLIDNLSFRIPAGAIVGIIGPNGAG 361 Query: 365 KSTLIKTVAGEIDPLSGTARLGKGLVIGYFAQHQVEMLRHDESPLWHLTRLAPDV----- 419 KSTL K + G+ P SG +G + Q + + +D ++ D+ Sbjct: 362 KSTLFKMITGKEQPDSGEVVIGTTAKVSIVDQSRDTL--NDGKTVFEDVTGGADILTVGR 419 Query: 420 REQELRNFLGSFNFNGTMATSSIAPFSGGEKARLALALIVWQRPNLLLLDEPTNHLDLET 479 E R +LG FNF G + SGGE+ RL LA + N+LLLDEP+N LD+ET Sbjct: 420 FEMPSRAYLGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLLMGGNVLLLDEPSNDLDVET 479 Query: 480 REALTMALAQFEGTLVLVSHDRHLL-RATTDQFLIVAEGKLQPFDGDLDDYK 530 AL AL +F G+++++SHDR L R T ++ FDG+ +Y+ Sbjct: 480 LRALEDALLEFAGSVLVISHDRWFLDRIATHILAFEGNSQVSFFDGNYQEYE 531 >gi|152982367|ref|YP_001352417.1| iron(III) ABC-type transport system, ATPase component [Janthinobacterium sp. Marseille] Length = 363 Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 34/243 (13%) Query: 310 LSAPNPLLVMEKVNAGYHIEGKNGAPDADKIIVHGIDFSLQNGQRIGLLGVNGAGKSTLI 369 + P+ L +E + GY + IVH + F+LQ G+ LLG +G GK+T++ Sbjct: 4 IPTPSAHLQLETIRVGYQLGSHMHE------IVHSLSFALQRGEIGCLLGQSGCGKTTVL 57 Query: 370 KTVAGEIDPLSGTARLGKGLVIGYFAQH-------QVEMLRHDESPLWHLT--------- 413 + +AG ++G LG + AQH V ++ D + HL+ Sbjct: 58 RAIAGFESLIAGRITLGGKELSN--AQHTTVPEARHVGVVFQDYALFPHLSVSDNIGFGL 115 Query: 414 -RLAPDVREQELRNFLGSFNFNGTMATSSIAP--FSGGEKARLALALIVWQRPNLLLLDE 470 +LA R + L G A P SGG++ R+ALA + +P+LLLLDE Sbjct: 116 RKLAAAERNGRINKLLA---LVGLQAQEKKFPHELSGGQQQRVALARALAPQPDLLLLDE 172 Query: 471 PTNHLDLETREALTM----ALAQFEGTLVLVSHDRHLLRATTDQFLIVAEGKLQPFDGDL 526 P ++LD++ RE L L + T VLV+HD+H A DQ ++ +G + +D Sbjct: 173 PFSNLDVDLRERLASEVRDILKEVGTTAVLVTHDQHEAFAIADQIGVMQDGVIVQWDQAY 232 Query: 527 DDY 529 + Y Sbjct: 233 NLY 235 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.318 0.134 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,463,829 Number of extensions: 62591 Number of successful extensions: 576 Number of sequences better than 1.0e-08: 23 Number of HSP's gapped: 552 Number of HSP's successfully gapped: 28 Length of query: 660 Length of database: 1,221,021 Length adjustment: 89 Effective length of query: 571 Effective length of database: 891,988 Effective search space: 509325148 Effective search space used: 509325148 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)