BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1980.p (202 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980412|ref|YP_001352237.1| acyl carrier protein phosphodie... 236 9e-64 gi|152983059|ref|YP_001352659.1| acyl carrier protein phosphodie... 118 2e-28 gi|152981730|ref|YP_001352918.1| acyl carrier protein phosphodie... 96 2e-21 gi|152979914|ref|YP_001353574.1| acyl carrier protein phosphodie... 62 3e-11 >gi|152980412|ref|YP_001352237.1| acyl carrier protein phosphodiesterase [Janthinobacterium sp. Marseille] Length = 204 Score = 236 bits (601), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 112/199 (56%), Positives = 141/199 (70%) Query: 1 MSTLLHIDSSARSDGSISRQLTASFVQQWQAKNPGGKVVHRDLAANALPHLNESMLGAYF 60 M+ +L+I+SS R+ SISR+ TA F+ +W+A+ P VV RD+AA LPH++ LGA+F Sbjct: 1 MTKILNINSSVRNGDSISRKATAEFISKWKAREPNAVVVERDVAAQPLPHIDGQTLGAFF 60 Query: 61 TPAEARSAEQAQVIQQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFK 120 TPAE R+AEQAQ+ + S+ LV EL AD IVIG PMYNF+ S LKAWIDHV RAG TFK Sbjct: 61 TPAENRTAEQAQIAKLSETLVQELFDADVIVIGAPMYNFSITSGLKAWIDHVARAGVTFK 120 Query: 121 YTETGPVGLATGKKAVIILSRGGKYSEGPMEALDFQGKYLKGALGFIGITDVELVVAEGV 180 YTE GPVGL TGKK I + GG YSEGP + +DF G YL+ LGFIG+TDV + +EG+ Sbjct: 121 YTEQGPVGLLTGKKVYIFTASGGVYSEGPAQVMDFNGTYLRAVLGFIGLTDVTFIQSEGI 180 Query: 181 SMGEEAAKAAVAGAQAKIN 199 +MG E + A A IN Sbjct: 181 AMGAEGVQKAQAKTSDAIN 199 >gi|152983059|ref|YP_001352659.1| acyl carrier protein phosphodiesterase [Janthinobacterium sp. Marseille] Length = 207 Score = 118 bits (296), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 97/182 (53%), Gaps = 2/182 (1%) Query: 4 LLHIDSSARSDGSISRQLTASFVQQWQAKNPGGKVVHRDLAANALPHLNESMLGAYFTPA 63 +LHID S R + S SRQL+A V++ P ++ RD AA LPH + +P Sbjct: 3 ILHIDCSPRPE-SHSRQLSAGIVKKLLEIEPNARISRRDFAAAPLPHASSDYATTLSSPV 61 Query: 64 EARSAEQAQVIQQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFKYTE 123 +A ++ S+ L+ E+ AAD IVIG PM N PS LKAWID + RAGRTFK T Sbjct: 62 TL-AAPLKGALELSETLIQEVDAADVIVIGTPMNNLTVPSVLKAWIDQILRAGRTFKSTP 120 Query: 124 TGPVGLATGKKAVIILSRGGKYSEGPMEALDFQGKYLKGALGFIGITDVELVVAEGVSMG 183 TG VG+ + I ++ GG ++ DF YL L IG+ +++ + + + Sbjct: 121 TGKVGMLRDRPVFIGIAAGGVFTGERANQPDFLTPYLSAVLDCIGLKNLQFLSVQATAFL 180 Query: 184 EE 185 ++ Sbjct: 181 DQ 182 >gi|152981730|ref|YP_001352918.1| acyl carrier protein phosphodiesterase [Janthinobacterium sp. Marseille] Length = 201 Score = 95.5 bits (236), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 14/196 (7%) Query: 1 MSTLLHIDSSARSDGS----ISRQLTASFVQQWQAKNPGGKVVHRDLAANALPHLNESML 56 M+ +L ++ SD S ++R+ A+ A + RDL LP + Sbjct: 1 MNRILLLNCGPHSDASHGYRLARETLAA------AGITDAHITERDLLQAPLPPIGRD-- 52 Query: 57 GAYFTPAEARSAEQAQVIQQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAG 116 Y + +A A +QQS+ L+ EL D + I PM+NF P+ LK W+DHV R Sbjct: 53 --YALAITSNAAHDADELQQSEQLIVELEQHDVLFIVTPMHNFTIPAALKLWLDHVIRIH 110 Query: 117 RTFKYTETGPVGLATGKKAVIILSRGGKYSEGPMEALDFQGKYLKGALGFIGITDVELVV 176 R+F T G VGL + +++S GG ++ + DF YL+ AL IGI+D+ Sbjct: 111 RSFAATPQGKVGLMKDRPTFVLVSSGGFFAGERAKQEDFLTPYLRYALASIGISDIHFFP 170 Query: 177 AEGVSMGEEAAKAAVA 192 +G+ G EA A++ Sbjct: 171 LQGLVFGPEAVAQAIS 186 >gi|152979914|ref|YP_001353574.1| acyl carrier protein phosphodiesterase [Janthinobacterium sp. Marseille] Length = 205 Score = 62.0 bits (149), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 13/201 (6%) Query: 4 LLHIDSSARSDGSISRQLTASFVQQWQAKNPGGKVVHRDLAANALPHLNESMLGAYF--- 60 LL+I S R S+S + +F+ + + P +V ++ P N +GA + Sbjct: 3 LLNIVCSPRGGKSVSIAIANTFLDAYGQRCPALEVDTLNVWEEDFPDFNNQAIGAKYKRV 62 Query: 61 TPAEARSAEQAQVIQQSDALVDELLAADTIVIGVPMYNFAPPSTLKAWIDHVFRAGRTFK 120 + +AEQA + + LV A+ IV+GVPM+NF+ P LK ID V + F Sbjct: 63 SKEALNNAEQA-AWKSIETLVQRFQRAERIVLGVPMWNFSYPYKLKQLIDLVSQRNMLFS 121 Query: 121 Y--TETGPVGLATGKKAVIILSRG---GKYSEGPMEALDFQGKYLKGALGFIGITDVELV 175 + + GP L +A++I RG G + P + Q Y+ L FIG+ +V + Sbjct: 122 FDGRQYGP--LLEIPRALVIHVRGQSRGLDIDSP--GFEHQADYIDFWLKFIGVANVLSI 177 Query: 176 VAEGVSMGEEAAKAAVAGAQA 196 E G AQA Sbjct: 178 QLEHTWDGRAPETIEAGKAQA 198 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.316 0.131 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 434,179 Number of extensions: 17182 Number of successful extensions: 73 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 4 Length of query: 202 Length of database: 1,221,021 Length adjustment: 79 Effective length of query: 123 Effective length of database: 928,958 Effective search space: 114261834 Effective search space used: 114261834 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 127 (53.5 bits)