BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1971.p
         (256 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980263|ref|YP_001355348.1| ABC-type molybdate transport sy...    87   7e-19
gi|152980108|ref|YP_001353186.1| molybdenum ABC transporter, per...    64   1e-11

>gi|152980263|ref|YP_001355348.1| ABC-type molybdate transport
           system substrate-binding protein [Janthinobacterium sp.
           Marseille]
          Length = 251

 Score = 87.4 bits (215), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 15/237 (6%)

Query: 25  AAQATDLVVSAAASLTNAFKELAQSFEQQHPGVKVITNFGASDILMQQIVRGAPADVFAS 84
           +A A ++ V+ AA+ T   K +A  FE+   G KV  +FGA+     QI  GAP DVF +
Sbjct: 20  SASAEEVQVAVAANFTAPMKVIAADFEKA-TGHKVTPSFGATGKFYAQITNGAPYDVFLA 78

Query: 85  ADQTAMDKAVAEKAVDAASRQNFAANQIVLIVPH----DAKQLPTSLADLTRAQYQRIAL 140
           AD     K   E  +   SR  +A  ++VL        DAK        L +A +  IAL
Sbjct: 79  ADDETPIKLEKENGIVPGSRFTYATGKLVLWSAKPDFVDAKG-----EVLKKANFAHIAL 133

Query: 141 GNPASVPFGRYTKAALEQAGLWPQVQAKAVMAENVRTSLDYVARGEVDAGFVFATDAAVM 200
             P   P+G   + ++++ G++  +QAK V  E++  +  +++ G  + GFV A      
Sbjct: 134 ATPKLAPYGLAAEESMKKLGVYDSLQAKFVQGESIGQTFTFISTGNAELGFV-ALSQVFE 192

Query: 201 PEKVK--VALRIPSD--TPATYPIAVTSGSRQPALAAQFVAYVRSSSGQAVLARYGF 253
             K+K   A  +P++   P      + +  +    AA+FV Y++S   +A++  YG+
Sbjct: 193 GGKIKSGSAWIVPANLHNPIRQDAVILNKGKDNKAAAEFVNYLKSEPVKAIIRSYGY 249


>gi|152980108|ref|YP_001353186.1| molybdenum ABC transporter,
           periplasmic molybdenum-binding protein
           [Janthinobacterium sp. Marseille]
          Length = 264

 Score = 63.5 bits (153), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 116/254 (45%), Gaps = 33/254 (12%)

Query: 21  LAAGAAQATDLVVSAAASLTNAFKELAQSFEQQHPGVKVITNFGASDILMQQIVRGAPAD 80
           L + AAQ+  L+  AA SL     E+ ++++QQ  G      +G S  L Q+I  GA  D
Sbjct: 20  LVSAAAQSYRLL--AAGSLHAVMDEMIRAYQQQG-GAAFDAQYGPSGKLRQEIENGAQVD 76

Query: 81  VFASADQTAMDKAVAEKAVDAASRQNFAANQIVLI----VPHDAKQLPTSLADLTRAQYQ 136
           VFASA      +A+A++ +   S   F  N + ++    +      L T LAD       
Sbjct: 77  VFASA-SVGHTEALAQQKLLGPSTL-FTHNDLCVLARPTLDLRTDNLLTMLADPAL---- 130

Query: 137 RIALGNPASVPFGRYTKAALEQA-----GLWPQVQAKAVMAENVRT-----SLDYVARGE 186
           RIA   PAS P G YT      A     G +  + A+AV             L Y+   E
Sbjct: 131 RIATSTPASDPMGDYTWQFFRNADRRIPGFYEVMNAQAVKLSGTHIPAADERLPYITAFE 190

Query: 187 ---VDAGFVFATDAA----VMPEKVKVALRIPSDTPATYPIAVTSGSRQPALAAQFVAYV 239
               DA  ++ T+A     V+P+   VA+    +  + Y IA  + S Q     +FV +V
Sbjct: 191 EDRADAYIMYCTNAVVTRKVLPQLKVVAIPDDLNVRSAYGIAAHTESEQ---GKRFVQFV 247

Query: 240 RSSSGQAVLARYGF 253
            +++GQA+L ++GF
Sbjct: 248 LAAAGQAILKKHGF 261


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.128    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 469,635
Number of extensions: 16689
Number of successful extensions: 78
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 75
Number of HSP's successfully gapped: 2
Length of query: 256
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 175
Effective length of database: 921,564
Effective search space: 161273700
Effective search space used: 161273700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 128 (53.9 bits)