BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1970.p (224 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981300|ref|YP_001355347.1| molybdate transport system perm... 131 3e-32 gi|152980225|ref|YP_001354281.1| sulfate transport system permea... 115 2e-27 gi|152980950|ref|YP_001352503.1| sulfate ABC transporter, permea... 113 1e-26 gi|152980049|ref|YP_001352502.1| sulfate transport system permea... 112 3e-26 gi|152981039|ref|YP_001354282.1| sulfate transport system permea... 92 3e-20 >gi|152981300|ref|YP_001355347.1| molybdate transport system permease protein [Janthinobacterium sp. Marseille] Length = 224 Score = 131 bits (330), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 125/205 (60%), Gaps = 4/205 (1%) Query: 8 LLLSLKVAGLATLLNLVLGVAAAYGLSRWRSPLRDFIDSVLTLPLVLPPTVMGYYLLVLF 67 ++L+LK+A L T++ L++G A+ L+R RS L+ + + + LP+VLPPTV+G+YLLV Sbjct: 10 IVLTLKLASLTTIILLLIGTPLAWWLARTRSWLKSPVGAFVALPIVLPPTVIGFYLLVAL 69 Query: 68 GRRGTFGAWLEGMGI-QLVFTWQGAVLASTVVAFPLVLKAARAAFESVDQQLENAARVLG 126 G G G + MG L F++ G V+ S + P V++ + AFE++ ++ A L Sbjct: 70 GPNGPVGQLTQAMGFGTLPFSFTGLVVGSVFYSMPFVVQPIQNAFEAMGERPLEVAATLR 129 Query: 127 VSEAGVFFRVSLPLATRGIMAGVLLAFARALGEFGATLMVAGNLPGRTQTLSVAIYEAVQ 186 S FF V+LPLA G + +++ FA +GEFG LM+ GN+P +T+ +SV IY+ V+ Sbjct: 130 ASPLDTFFSVTLPLAKPGYLTAIVMGFAHTVGEFGVVLMIGGNIPNQTRMISVQIYDHVE 189 Query: 187 AGDDGAATLL---VIITSLTCIVLL 208 A + A L +++ S+ +++L Sbjct: 190 ALEYAQAHWLAAGMLVFSMAVLIIL 214 >gi|152980225|ref|YP_001354281.1| sulfate transport system permease protein [Janthinobacterium sp. Marseille] Length = 260 Score = 115 bits (289), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/184 (33%), Positives = 109/184 (59%) Query: 10 LSLKVAGLATLLNLVLGVAAAYGLSRWRSPLRDFIDSVLTLPLVLPPTVMGYYLLVLFGR 69 ++++ A +T++ +G A+ ++R+ P R IDS++ LP LP +V G L LF Sbjct: 48 ITIQGAFYSTIIVTFIGFLLAWIITRYDFPGRRLIDSLVDLPFALPTSVAGITLSALFIP 107 Query: 70 RGTFGAWLEGMGIQLVFTWQGAVLASTVVAFPLVLKAARAAFESVDQQLENAARVLGVSE 129 G G W E GI++ + + G V+A T + P ++++ + E ++++LE AA +LG ++ Sbjct: 108 TGWLGQWFEIFGIKISYAFPGIVVAMTFTSLPFIVRSVQPVLEDMEKELEEAALMLGANK 167 Query: 130 AGVFFRVSLPLATRGIMAGVLLAFARALGEFGATLMVAGNLPGRTQTLSVAIYEAVQAGD 189 +F+RV LP ++ G AF R+LGEFGA +M+AGN+P T+ S+ ++ +Q + Sbjct: 168 WQIFWRVILPTLIPALITGSSQAFIRSLGEFGAVIMIAGNIPFETEVTSLMLFVRLQEYN 227 Query: 190 DGAA 193 AA Sbjct: 228 YPAA 231 >gi|152980950|ref|YP_001352503.1| sulfate ABC transporter, permease protein [Janthinobacterium sp. Marseille] Length = 302 Score = 113 bits (282), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 120/217 (55%), Gaps = 4/217 (1%) Query: 10 LSLKVAGLATLLNLVLGVAAAYGLSRWRSPLRDFIDSVLTLPLVLPPTVMGYYLLVLFGR 69 L+L A +A LNLV GVAA++ ++++ + + +++ LP + P + G ++LFG Sbjct: 82 LTLLTAAIAVPLNLVFGVAASWCIAKFDFRGKSILLTLIDLPFSVSPVISGLIYVLLFGA 141 Query: 70 RGTFGAWLEGMGIQLVFTWQGAVLASTVVAFPLVLKAARAAFESVDQQLENAARVLGVSE 129 +G FG WL+ I+++F G VLA+ V FP V + +S + E AA VLG S Sbjct: 142 QGWFGGWLQEHNIKILFAVPGIVLATIFVTFPFVARELIPLMQSQGSEEEEAALVLGASG 201 Query: 130 AGVFFRVSLPLATRGIMAGVLLAFARALGEFGATLMVAGNLPGRTQTLSVAI---YEAVQ 186 F+ V+LP G++ GV+L ARA+GEFGA +V+G++ G+T T+ + + Y Q Sbjct: 202 WKTFWHVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTIPLQVEILYNEYQ 261 Query: 187 -AGDDGAATLLVIITSLTCIVLLMIAGRLVPDRSQLR 222 + A+LL ++ +T + I RL Q + Sbjct: 262 FSAAFAVASLLAMLALVTLALKSFIEWRLRDTHEQFQ 298 >gi|152980049|ref|YP_001352502.1| sulfate transport system permease protein [Janthinobacterium sp. Marseille] Length = 287 Score = 112 bits (279), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 107/200 (53%) Query: 10 LSLKVAGLATLLNLVLGVAAAYGLSRWRSPLRDFIDSVLTLPLVLPPTVMGYYLLVLFGR 69 LS + + +LN G A+ L R++ P + ID+++ LP LP V G L L+ Sbjct: 70 LSFGASLIGAVLNAFFGGIVAWVLVRYKFPGKKIIDAMVDLPFALPTAVAGIALTALYSP 129 Query: 70 RGTFGAWLEGMGIQLVFTWQGAVLASTVVAFPLVLKAARAAFESVDQQLENAARVLGVSE 129 G G +LE +GI++ FT G ++A T + P V++ + E ++++LE AA LG S Sbjct: 130 NGWIGRYLEAIGIKVAFTPLGVIIALTFIGLPFVVRTVQPVLEDMEKELEEAAASLGASH 189 Query: 130 AGVFFRVSLPLATRGIMAGVLLAFARALGEFGATLMVAGNLPGRTQTLSVAIYEAVQAGD 189 F +V P ++ G LAFARA GE+G+ + +AGN+P ++ + I ++ D Sbjct: 190 WQTFTKVIFPTVFPALLTGFALAFARATGEYGSVIFIAGNMPMVSEITPLFIVTKLEQYD 249 Query: 190 DGAATLLVIITSLTCIVLLM 209 AT + ++ L ++L+ Sbjct: 250 YAGATAIAVVMLLASFLMLL 269 >gi|152981039|ref|YP_001354282.1| sulfate transport system permease protein [Janthinobacterium sp. Marseille] Length = 283 Score = 92.0 bits (227), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 90/168 (53%) Query: 10 LSLKVAGLATLLNLVLGVAAAYGLSRWRSPLRDFIDSVLTLPLVLPPTVMGYYLLVLFGR 69 L+L A L +NLV G+ A+ ++ + R + +++ +P P V G+ LV++G Sbjct: 62 LTLTAAVLTVPINLVFGILLAWCVTHYDFFGRRLLVTLVEIPYATSPVVAGFCYLVVYGL 121 Query: 70 RGTFGAWLEGMGIQLVFTWQGAVLASTVVAFPLVLKAARAAFESVDQQLENAARVLGVSE 129 GT G WL +QL+F W G ++ + V P + + + + E AA LG S Sbjct: 122 EGTIGKWLYANDVQLMFAWPGIIMVTVFVTAPYIARILMPLMQKQGTEEEIAALSLGASG 181 Query: 130 AGVFFRVSLPLATRGIMAGVLLAFARALGEFGATLMVAGNLPGRTQTL 177 +F+RV+LP ++ G ++ ARA+GEFGA +V+G + +T TL Sbjct: 182 WQIFWRVTLPNIKWALLYGAVITNARAVGEFGAVAVVSGTIMNQTLTL 229 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.327 0.141 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 479,552 Number of extensions: 17571 Number of successful extensions: 129 Number of sequences better than 1.0e-08: 8 Number of HSP's gapped: 127 Number of HSP's successfully gapped: 8 Length of query: 224 Length of database: 1,221,021 Length adjustment: 80 Effective length of query: 144 Effective length of database: 925,261 Effective search space: 133237584 Effective search space used: 133237584 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 128 (53.9 bits)