BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1968.p
         (434 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980416|ref|YP_001353633.1| isocitrate lyase [Janthinobacte...   806   0.0  
gi|152981126|ref|YP_001355177.1| carboxyvinyl-carboxyphosphonate...    69   6e-13

>gi|152980416|ref|YP_001353633.1| isocitrate lyase
           [Janthinobacterium sp. Marseille]
          Length = 440

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/432 (87%), Positives = 407/432 (94%)

Query: 1   MSTREQQIQALERDWAENPRWKGIKRNYSAADVVRLRGSLQIEHTLAKRGADKLWNLVHN 60
           M+ REQQI AL +DW ENPRWKG+ RNY+A DVVRLRGSLQ+EHTLA+RGADKLW + +N
Sbjct: 1   MANREQQIAALNKDWQENPRWKGVTRNYTAEDVVRLRGSLQVEHTLAQRGADKLWEMCNN 60

Query: 61  EPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPMVVK 120
           EPFVN+LGALTGNQAMQQVKAGLKAIYLSGWQVAGDAN+AGEMYPDQSLYPANSVP+VVK
Sbjct: 61  EPFVNSLGALTGNQAMQQVKAGLKAIYLSGWQVAGDANVAGEMYPDQSLYPANSVPLVVK 120

Query: 121 RINNTFARADQIQWSEGRDDIDFFAPIVADAEAGFGGVLNAFELMKSMIEAGAAGVHFED 180
           RINNTF  ADQIQWSEG+ D+DFFAPIVADAEAGFGGVLNA+ELMK+MIEAGAAGVHFED
Sbjct: 121 RINNTFQCADQIQWSEGKGDLDFFAPIVADAEAGFGGVLNAYELMKAMIEAGAAGVHFED 180

Query: 181 QLASVKKCGHMGGKVLVPTREACEKLNAARLAADVMGTKTLVIARTDAEAADLLTSDVDA 240
           QLASVKKCGHMGGKVLVPTREA EKLNAARLAADV GT+TLVIARTDAEAADLLTSDVDA
Sbjct: 181 QLASVKKCGHMGGKVLVPTREAVEKLNAARLAADVCGTRTLVIARTDAEAADLLTSDVDA 240

Query: 241 NDKPFLSGERTVEGFFKTHPGIDQAISRGLAYAEYADMVWCETGKPDLAFAKTFAEAIHA 300
           NDKPFL+GERTVEGF+KT  G DQA+SRGLAYA Y DM+WCETGKPDL FA+ FA+AIHA
Sbjct: 241 NDKPFLTGERTVEGFYKTRAGFDQAVSRGLAYAPYVDMLWCETGKPDLEFARQFADAIHA 300

Query: 301 KFPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHALNYSMFNLAH 360
           KFPGK+LAYNCSPSFNW+KNLDDATIAKFQ+ELGAMGYKFQFITLAGFH+LNYSMFNLAH
Sbjct: 301 KFPGKMLAYNCSPSFNWRKNLDDATIAKFQKELGAMGYKFQFITLAGFHSLNYSMFNLAH 360

Query: 361 GYARNQMSAFVELQEAEFAAAAKGFTAVKHQREVGTGYFDAVTQAIQQGQSSTTALHGST 420
           GYARNQMSAFVELQEAEFAAA KGFTAVKHQREVGTGYFDA+TQ IQQGQSSTTALHGST
Sbjct: 361 GYARNQMSAFVELQEAEFAAADKGFTAVKHQREVGTGYFDAITQVIQQGQSSTTALHGST 420

Query: 421 EDEQFFDDKAKK 432
           EDEQFF+ K  K
Sbjct: 421 EDEQFFESKVAK 432


>gi|152981126|ref|YP_001355177.1| carboxyvinyl-carboxyphosphonate
           phosphorylmutase [Janthinobacterium sp. Marseille]
          Length = 293

 Score = 68.9 bits (167), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 94/216 (43%), Gaps = 53/216 (24%)

Query: 68  GALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPMVVKRINNTFA 127
           GA     A      G +A+Y++G   AG  N+   M PDQ     N +     RI     
Sbjct: 26  GAFNALSARVIADLGFEALYITG---AGVTNMYFGM-PDQGFIGLNELADHTARI----- 76

Query: 128 RADQIQWSEGRDDIDFFAPIVADAEAGFGGVLNAFELMKSMIEAGAAGVHFEDQLASVKK 187
                     RD +D   PI+ DA+ GFG  LN    ++++  AGA  V  EDQ+ S K+
Sbjct: 77  ----------RDAVDI--PIIVDADTGFGNALNVRHTIRTLERAGADAVQLEDQI-SPKR 123

Query: 188 CGHMGGKVLVPTREACEKLNAARLAADVMGTKTLVIARTDAEAADLLTSDVDANDKPFLS 247
           CGH  GK ++   E   K++AA  A    G   L++ARTDA                   
Sbjct: 124 CGHFNGKEVISCAEMVGKIHAAVDARSDAG--MLIMARTDA------------------- 162

Query: 248 GERTVEGFFKTHPGIDQAISRGLAYAEY-ADMVWCE 282
             R+V GF       + A+ R   Y+E  AD+++ E
Sbjct: 163 --RSVHGF-------EDALERAARYSEAGADILFVE 189


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.132    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 985,683
Number of extensions: 40302
Number of successful extensions: 115
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 114
Number of HSP's successfully gapped: 2
Length of query: 434
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 348
Effective length of database: 903,079
Effective search space: 314271492
Effective search space used: 314271492
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)