BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1940.p (318 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152983090|ref|YP_001353418.1| glucosyl transferase [Janthinob... 171 4e-44 gi|152983102|ref|YP_001353455.1| glucosyl transferase [Janthinob... 171 5e-44 gi|152980824|ref|YP_001354046.1| glycosyltransferase involved in... 170 9e-44 gi|152981855|ref|YP_001354524.1| hypothetical protein mma_2834 [... 149 2e-37 >gi|152983090|ref|YP_001353418.1| glucosyl transferase [Janthinobacterium sp. Marseille] Length = 347 Score = 171 bits (434), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 105/319 (32%), Positives = 171/319 (53%), Gaps = 8/319 (2%) Query: 4 ELSVVIPVYNEESGLSKLFERLYPALDALGYSYEVIFVNDGSRDRSAGILAEQYRLRPDV 63 +LSV++P++NEES L ERL AL L + +EVI+V+DGS D S IL +Q R++ Sbjct: 19 KLSVIVPLFNEESVLRIFHERLEMALSGLKHEWEVIYVDDGSTDSSHNIL-QQLRVQSFR 77 Query: 64 TRVVLFNGNYGQHMAIMAGFEATRGDVVVTLDADLQNPPEEIGNLVAKMREGYDYVGSIR 123 V F N+G+ A+ AG GD V +D+DLQ+PPE I +++ G D V R Sbjct: 78 VGVARFTRNFGKEEAMSAGLRLATGDAAVIIDSDLQDPPELIPSMIEAWLAGADIVNMRR 137 Query: 124 RKRQDSAW-RTYASKAMNRLREKITRIKMTDQGNMLRAYGRNVIDLVNKCREVNTFVPAL 182 R R +W + + A R+ +++ + + R R I+ +N +E N F+ L Sbjct: 138 RHRSGESWVKKVTAHAFYRVINRLSDVPVPADVGDFRLLSRRAINALNLLQERNRFMKGL 197 Query: 183 AYTFSRNPTEIVVEHEERSAGESKYSFYSLIRLNFDLVTGFSLVPLQFFSLLG---IGLS 239 + R+AG++K+ ++ L + +TGFS+ PL+ + LG G++ Sbjct: 198 FAWIGYKHVTLDYNRAARAAGKTKWRYWRLWNFALEGITGFSVAPLKIATYLGSVCAGMA 257 Query: 240 FASAALFILIVLRRLLIGAEVGGVFTLFAISFFLMGVILFSIGLLGEYIGRIYMQVRSRP 299 F A F+ L+ +LIG V G TL L G+ L +IG++GEY+GR++++ + RP Sbjct: 258 FFYAMYFL---LKTVLIGESVRGFPTLIVTVMILGGLQLMAIGIIGEYLGRLFIESKRRP 314 Query: 300 RYVVQAILEQSTSEDKQAL 318 Y+++ S S+D + L Sbjct: 315 LYLLEDYQPPSLSKDVENL 333 >gi|152983102|ref|YP_001353455.1| glucosyl transferase [Janthinobacterium sp. Marseille] Length = 348 Score = 171 bits (433), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 108/316 (34%), Positives = 172/316 (54%), Gaps = 10/316 (3%) Query: 4 ELSVVIPVYNEESGLSKLFERLYPALDALGYSYEVIFVNDGSRDRSAGILAEQYRLRPDV 63 +LSV++P++NEES L ERL AL L E+I+V+DGS D+S +L Q RL Sbjct: 19 KLSVIVPLFNEESVLPIFHERLKNALSGLHQDCEIIYVDDGSTDKSHFLLT-QLRLANPK 77 Query: 64 TRVVLFNGNYGQHMAIMAGFEATRGDVVVTLDADLQNPPEEIGNLVAKMREGYDYVGSIR 123 V F N+G+ A+ AG GD V+ +DADLQ+PPE I ++A G D V R Sbjct: 78 IGVARFTRNFGKEEAMSAGLRLATGDAVIIIDADLQDPPELIPEMLAAWLGGADIVNMRR 137 Query: 124 RKRQDSAW-RTYASKAMNRLREKITRIKMTDQGNMLRAYGRNVIDLVNKCREVNTFVPAL 182 R R +W + + A R+ +++ + + R R +D +N E N F+ L Sbjct: 138 RFRSGESWLKKATAHAFYRVINRLSDVPVPADVGDFRLLSRRAVDALNLLEERNRFMKGL 197 Query: 183 -AYTFSRNPTEIVVEHEERSAGESKYSFYSLIRLNFDLVTGFSLVPLQFFSLLGI---GL 238 A+ R+ T + + + R+AG +K+ ++ L + +TGFS+ PL+ + LG+ G+ Sbjct: 198 FAWVGYRHVT-LDYDRDARAAGTTKWRYWRLWNFALEGITGFSVAPLKIATYLGLLFSGM 256 Query: 239 SFASAALFILIVLRRLLIGAEVGGVFTLFAISFFLMGVILFSIGLLGEYIGRIYMQVRSR 298 +F A F++ + LLIG V G TL L G+ L +IG++GEY+GR++++ + R Sbjct: 257 AFLYALYFLI---KTLLIGESVRGFPTLIVTVMILGGLQLMAIGIIGEYLGRLFIESKRR 313 Query: 299 PRYVVQAILEQSTSED 314 P Y+++ S ED Sbjct: 314 PLYLLEQYEPPSQPED 329 >gi|152980824|ref|YP_001354046.1| glycosyltransferase involved in cell wall biogenesis [Janthinobacterium sp. Marseille] Length = 338 Score = 170 bits (431), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 106/319 (33%), Positives = 174/319 (54%), Gaps = 10/319 (3%) Query: 4 ELSVVIPVYNEESGLSKLFERLYPALDALGYSYEVIFVNDGSRDRSAGILAEQYRLRPDV 63 +L+VV+P++NEES L RL L+++ + +E+I+V+DGS D+S IL +Q + Sbjct: 19 KLTVVVPLFNEESVLPLFHARLESVLESIRHDWEIIYVDDGSTDQSPLIL-QQIKAASAR 77 Query: 64 TRVVLFNGNYGQHMAIMAGFEATRGDVVVTLDADLQNPPEEIGNLVAKMREGYDYVGSIR 123 V F N+G+ A+ AG RGD V+ +DADLQ+PPE I ++ G D V R Sbjct: 78 VGVARFTRNFGKEEAMSAGLGLARGDAVIIIDADLQDPPELIPAMLDAWLAGADIVNMRR 137 Query: 124 RKRQDSAW-RTYASKAMNRLREKITRIKMTDQGNMLRAYGRNVIDLVNKCREVNTFVPAL 182 +R +W + + A R+ +++ + + + R R +D +N E N F+ L Sbjct: 138 LQRSGESWFKKATAHAFYRVINRLSEVPVPEDVGDFRLLSRRAVDALNLLEERNRFMKGL 197 Query: 183 -AYTFSRNPTEIVVEHEERSAGESKYSFYSLIRLNFDLVTGFSLVPLQFFSLLG---IGL 238 A+ RN T + + R AG+SK+ ++ L + +TGFS+ PL+ + LG G+ Sbjct: 198 FAWIGYRNVT-LDYNRDARVAGKSKWQYWRLWNFALEGITGFSVAPLKIATYLGSACAGI 256 Query: 239 SFASAALFILIVLRRLLIGAEVGGVFTLFAISFFLMGVILFSIGLLGEYIGRIYMQVRSR 298 +F AA F L + LL+G V G TL L G+ L +IG++GEY+GR++++ + R Sbjct: 257 TFIYAAYFFL---KTLLVGESVKGFPTLIVTVMILGGLQLMAIGIIGEYLGRLFIESKRR 313 Query: 299 PRYVVQAILEQSTSEDKQA 317 P Y+++ +ED A Sbjct: 314 PLYLLEEYDAPLAAEDLHA 332 >gi|152981855|ref|YP_001354524.1| hypothetical protein mma_2834 [Janthinobacterium sp. Marseille] Length = 338 Score = 149 bits (377), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 157/319 (49%), Gaps = 9/319 (2%) Query: 5 LSVVIPVYNEESGLSKLFERLYPALDALGYSYEVIFVNDGSRDRSAGILAEQYRLRPDVT 64 +S VIP YNE + L+ L L YE+I +NDGS D + ++A L Sbjct: 17 ISCVIPAYNEAAHLADFLRDLRKTLAGFAVRYEIIVINDGSSDNTDQVMAPL--LAESGL 74 Query: 65 RVVLFNGNYGQHMAIMAGFEATRGDVVVTLDADLQNPPEEIGNLVAKMREGYDYV-GSIR 123 R + F+ N+G+ A+ AG +A +GD V+ +D+D Q+P E + + + G D V G I Sbjct: 75 RYISFSRNFGKEAALSAGIDAAQGDAVILMDSDYQHPLELLPEMTRLWQSGIDMVYGVIS 134 Query: 124 RKRQDSAWRTYASKAMNRLREKITRIKMTDQGNMLRAYGRNVIDLVNKCREVNTFVPALA 183 + +S + + + L E + I + R + V++ + + E N F+ L Sbjct: 135 DRSNESRLKRWGTGMFYHLMESGSPITIPRNAGDFRLMDKQVVNALRQLPERNRFMKGLY 194 Query: 184 YTFSRNPTEIVVEHEERSAGESKYSFYSLIRLNFDLVTGFSLVPLQFFSLLGIGLSFASA 243 + + +R+ G S +++ SL RL VT F+ +PL+ +S +G+ +S + Sbjct: 195 AWVGFSSIALPFVPADRATGVSSFNYRSLSRLALAGVTAFTTLPLRIWSGVGVVISIVAL 254 Query: 244 ALFILIVLRRLLIGAEVGGVFTLFAISFFLMGVILFSIGLLGEYIGRIYMQVRSRPRYVV 303 I LL G +V G TL A F G+ L SIG+LGEY+GR+Y +V+ RP YVV Sbjct: 255 MYAFWIAGESLLFGNDVPGWSTLAAGLMFFSGIQLISIGVLGEYLGRVYDEVKKRPLYVV 314 Query: 304 Q------AILEQSTSEDKQ 316 + STS DK Sbjct: 315 AHDINNGPLNSSSTSVDKD 333 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.324 0.140 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 685,428 Number of extensions: 27264 Number of successful extensions: 97 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 89 Number of HSP's successfully gapped: 4 Length of query: 318 Length of database: 1,221,021 Length adjustment: 83 Effective length of query: 235 Effective length of database: 914,170 Effective search space: 214829950 Effective search space used: 214829950 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 129 (54.3 bits)