BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1936.p
         (147 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981397|ref|YP_001352999.1| bacterioferritin comigratory pr...   266   3e-73
gi|152981345|ref|YP_001355069.1| antioxidant protein LsfA [Janth...    54   4e-09

>gi|152981397|ref|YP_001352999.1| bacterioferritin comigratory
           protein [Janthinobacterium sp. Marseille]
          Length = 164

 Score =  266 bits (681), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 119/147 (80%), Positives = 135/147 (91%)

Query: 1   VPEFSAAMTSGKTFKLADYRGKNLVLYFYPKDNTPGCTTEGIQFRDLHPQFQAANTEIFG 60
           VP+FSAAMT  +TF+LADY+GK +VLYFYPKDNTPGCTTEGIQFRDLH QFQ AN EIFG
Sbjct: 18  VPDFSAAMTGEQTFQLADYKGKKIVLYFYPKDNTPGCTTEGIQFRDLHAQFQQANAEIFG 77

Query: 61  ISRDSLKSHENFKGKLEMPFELISDPDETLCTMFDVMKMKNMYGKQVRGVERSTFVIDAA 120
           +SRDSL+SHE FK KL++PFELISDPDETLCTMFDVMKMKNMYGK+VRG+ERSTF+ID +
Sbjct: 78  VSRDSLRSHEGFKAKLDLPFELISDPDETLCTMFDVMKMKNMYGKKVRGIERSTFIIDES 137

Query: 121 GKVVKEWRGVKVPAHVDEVLSFIKTLA 147
           GK+VKEWRGVKVP H+DEVL F+K LA
Sbjct: 138 GKLVKEWRGVKVPGHIDEVLEFVKALA 164


>gi|152981345|ref|YP_001355069.1| antioxidant protein LsfA
           [Janthinobacterium sp. Marseille]
          Length = 212

 Score = 53.9 bits (128), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 12/129 (9%)

Query: 2   PEFSAAMTSGKTFKLADYRGKN-LVLYFYPKDNTPGCTTEGIQFRDLHPQFQAANTEIFG 60
           P+F+   + GK  K  ++ G + +VL+ +P D TP CTTE      L P+F   N +   
Sbjct: 10  PDFTQDSSIGK-IKFHEWAGDSWVVLFSHPADFTPVCTTELGLTAKLKPEFDKRNVKAIA 68

Query: 61  ISRDSLKSHENFKGKLE------MPFELISDPDETLCTMFDVMKMKNMYGKQVRGVERST 114
           +S D  + H  +   +E      + F +++D D+++ T++D++         V    RS 
Sbjct: 69  LSVDPAEKHVEWIKDIEATQKTVVGFPIVADADKSVSTLYDMIHPNQSATATV----RSL 124

Query: 115 FVIDAAGKV 123
           FVID   K+
Sbjct: 125 FVIDPQKKI 133


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.136    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 329,465
Number of extensions: 11760
Number of successful extensions: 33
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 34
Number of HSP's successfully gapped: 2
Length of query: 147
Length of database: 1,221,021
Length adjustment: 75
Effective length of query: 72
Effective length of database: 943,746
Effective search space: 67949712
Effective search space used: 67949712
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)