BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1859.p
         (396 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982337|ref|YP_001352332.1| glycosyl transferase, group 2 f...   362   e-101

>gi|152982337|ref|YP_001352332.1| glycosyl transferase, group 2
           family protein [Janthinobacterium sp. Marseille]
          Length = 395

 Score =  362 bits (928), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/352 (55%), Positives = 244/352 (69%)

Query: 45  RPRIAVLVPAHNEAGGIGEVVAGIVAQLGQADRVLVVADNCGDETAPIARAAGAEVTERS 104
           RP +AVLVPAHNEA GI   VAGI  QL + DR+LVVADNC D+TA +A AAGA V ER 
Sbjct: 44  RPVVAVLVPAHNEAHGIAATVAGIREQLREGDRILVVADNCDDDTAELALAAGAPVLERE 103

Query: 105 HAELRGKGYALDHGIKHLAADAPEVVIIVDADCYLAEQALEKLARACVQSGRPVQALYLM 164
               RGKGYALD G++ LA   PEV+II+DADC L   ++  LA   +++ RPVQAL LM
Sbjct: 104 DLYARGKGYALDAGVRQLALSPPEVLIIIDADCRLKAGSITHLACRALETHRPVQALDLM 163

Query: 165 HAPEGGGPMRKIAEFAWLVKNLVRPLGFQKLGQPCQLMGTGMAFTWPQISQADLATGHIV 224
            AP G G   +IAEFAW+VKN VR LGF  LG PCQLMGTGMAF W  I+QA LA GH+ 
Sbjct: 164 RAPRGAGLKIRIAEFAWIVKNKVRALGFHHLGLPCQLMGTGMAFPWELIAQASLANGHLA 223

Query: 225 EDMKLGVDLAEAGQPPLFCPEAVVYSYFPSSDSGVSTQRTRWEHGHLSVIQTYVPRLLGG 284
           EDMKLG++LA A   P+FCPEA V SYFP  D     QRTRWEHGH+ +I +    LL  
Sbjct: 224 EDMKLGIELARADAAPVFCPEACVVSYFPHGDEAARMQRTRWEHGHMGMIVSEGLPLLWQ 283

Query: 285 AFKRGNGALAALALDLSVPPLALLVMLVVAAWCGNLLIWLVLGLSWPLLVSSLLLLAIGA 344
             +  N AL A+ALD+ VPPLALL M+  A +    L +LV  ++ PLL++++LL A+  
Sbjct: 284 GLREKNRALFAMALDMCVPPLALLTMVSCAVFAVAALNFLVFDVAAPLLLATVLLAALTL 343

Query: 345 SVLLAWGGYGRKVISLAELLGAFGYMARKLPLYFKFLFNRQVAWVRSKRDSE 396
           ++LL+W  +G++V+SL +L  A GY   KLPLY KF  NRQ+ WVR+KRD+E
Sbjct: 344 AILLSWQRFGQQVLSLKDLFSALGYAFWKLPLYMKFFVNRQLEWVRAKRDAE 395


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.324    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 733,781
Number of extensions: 27841
Number of successful extensions: 135
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 135
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 1,221,021
Length adjustment: 85
Effective length of query: 311
Effective length of database: 906,776
Effective search space: 282007336
Effective search space used: 282007336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 130 (54.7 bits)