BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1857.p
         (680 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152983083|ref|YP_001353398.1| hypothetical protein mma_1708 [...   251   1e-67
gi|152983082|ref|YP_001353397.1| hypothetical protein mma_1707 [...   175   9e-45

>gi|152983083|ref|YP_001353398.1| hypothetical protein mma_1708
           [Janthinobacterium sp. Marseille]
          Length = 484

 Score =  251 bits (641), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 166/512 (32%), Positives = 256/512 (50%), Gaps = 34/512 (6%)

Query: 170 LAIEEQFYLFWPLLLALVWKRKWGFLRIIAVIALASFAVNLYLVGNDQTAAFYSPFARFW 229
           + +EEQFYL WPL++  V+KRK+    II+++  ASF + +  + +   A+F+ P  R W
Sbjct: 1   MVVEEQFYLVWPLVVWFVYKRKFSLFAIISILLAASFLLGIATIKSHPAASFFLPVTRLW 60

Query: 230 ELMVGGTLGYISLHRADLNAR-FKNLQSWLGVLLLAIGFVLLNGTRSFPGWWALLPCIGA 288
           EL+ G  L Y+S+    +    ++NL S +G+ LL+ G   L+ T  FPG   L+P IGA
Sbjct: 61  ELLAGAALAYLSVQGRQIKGETYQNLVSLVGLFLLSYGIFRLSAT-GFPGVKGLVPVIGA 119

Query: 289 FLLLSAGPAAWFNSKVLASKPMVWIGLISYPLYLWHWPLLAFATIIAGQTAPQEWRLLAV 348
             L++AGP AW N  +L S+  V IGLISYPLYLWHWPLL+FA I+   T     R   V
Sbjct: 120 LCLIAAGPGAWLNRHILGSRLFVGIGLISYPLYLWHWPLLSFARILEAGTPSPAIRAAIV 179

Query: 349 VAAVLLAWGTFLFIERPLRHAGSVKIVLVLVALNIVVGAAGMVIYRNGGFPQRAINQKLD 408
             + +LA  TFL +ERPL+   + +++ +L+ L + VGA G +IY   G   R  N +  
Sbjct: 180 GISFILAILTFLLLERPLKRIAATRLMPILLTLLLSVGATGALIYWKDGVASRFANDQNA 239

Query: 409 YLARSDVFEGSRNSDGSCARLNHLTEVSEEVCLSNSAQPQVLFVGDSHVMALHSAIFSRQ 468
              R D F G    D  C +    ++V+   C +  + P V   GDSH   L   +  + 
Sbjct: 240 LFVRGDYFGGLDIRD--CGK--EFSKVASTHCRTTDS-PTVAIFGDSHTAHLFYGMAIQP 294

Query: 469 LALPSIMVAGHACRVYPNLPYEPANVRRWSNNCTEIAQQAIAVGQKFPSIQTVVISGAYP 528
                +M+ G AC         PA        CT+  + A+ +    P+IQTV++   Y 
Sbjct: 295 RDNAVMMLLGGAC--------PPAKGVEVRPGCTQQYEDALRMIASTPTIQTVILVAYYA 346

Query: 529 RGNLDTPSQYKVNGSSLSEREAFMSGYGALIESFIAQGKRVVFMADVPYLKLDPHSCVS- 587
             + +            + R+  ++GY   I     +GK+V+F+AD P LK+   +C + 
Sbjct: 347 YSDDE------------AMRKKMLAGYRQTIADL--KGKKVIFLADTPTLKVSAETCFTR 392

Query: 588 --RFGDAPTRECAFTQAEHERIRKAYDAAVDELRQLHPKATVFDPVSLFCAQGKCQAKID 645
             R       +C   ++  +  R  Y+  V  + + +    VFDP  LFC    C+A  D
Sbjct: 393 PVRLSSHALEKCDLPKSAFDSSRVIYNDFVKSIGEENQSVRVFDPTPLFCNTQVCEAVHD 452

Query: 646 GAYLYNDDQHISLAASKYLLQ--SMQRDGLLP 675
           G   Y D+ H+S    + L +   ++R  L P
Sbjct: 453 GKLQYTDNNHLSRDGGRRLAEWLDVERSRLSP 484


>gi|152983082|ref|YP_001353397.1| hypothetical protein mma_1707
           [Janthinobacterium sp. Marseille]
          Length = 232

 Score =  175 bits (443), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 82/138 (59%), Positives = 102/138 (73%)

Query: 33  HPKYRPDIDGLRAIAVASVVIFHAFPEWFKGGFIGVDIFFVISGFLISLIIFNNLEHDRF 92
           H KYRPDIDGLRA+A+  VVIFHAFP++  GGF+GVDIFFVISGFLIS II   +   +F
Sbjct: 55  HIKYRPDIDGLRAVAILPVVIFHAFPQYVIGGFVGVDIFFVISGFLISSIIIKEINEGKF 114

Query: 93  SILDFYVRRVKRIFPALMTVMIVCAVAGAAILFADEYRQLGKHLLGGSTFISNILFWRES 152
           +   FY RR+KRIFPAL+ ++  C  AG   L  +E+  LGKH+L G+ F+SN +   E 
Sbjct: 115 TFQQFYARRIKRIFPALILILTTCLAAGWIALMPNEFDSLGKHVLSGAGFVSNFVLLSEL 174

Query: 153 GYFDNSAETKPLLHLWSL 170
           GYFD++AE KPLLHLWSL
Sbjct: 175 GYFDSAAEFKPLLHLWSL 192


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.325    0.139    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,558,846
Number of extensions: 63874
Number of successful extensions: 238
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 234
Number of HSP's successfully gapped: 3
Length of query: 680
Length of database: 1,221,021
Length adjustment: 90
Effective length of query: 590
Effective length of database: 888,291
Effective search space: 524091690
Effective search space used: 524091690
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 133 (55.8 bits)