BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1808.p
         (342 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979829|ref|YP_001353065.1| beta-N-acetylhexosaminidase [Ja...   490   e-140

>gi|152979829|ref|YP_001353065.1| beta-N-acetylhexosaminidase
           [Janthinobacterium sp. Marseille]
          Length = 350

 Score =  490 bits (1262), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 247/329 (75%), Positives = 267/329 (81%), Gaps = 3/329 (0%)

Query: 8   LGPVMLDVVGTHLDAADIARIQHPLTGGVILFARNYESRAQLVALTAAIRQARPGILIAV 67
            GPVMLDVVGT L A DI RIQHPLTGGVILFARNY  RAQL ALTAAI  ARPGI+IAV
Sbjct: 10  FGPVMLDVVGTTLSADDIRRIQHPLTGGVILFARNYTDRAQLTALTAAIHAARPGIVIAV 69

Query: 68  DHEGGRVQRFRSDGFTRLPAMGLLGQLWERDVLQATKLATATGFVLAAELRACGIDLSFT 127
           DHEGGRVQRF++DGFT LPAM  LG LW++DVL ATK AT  G+VLAAELRACG+DLSFT
Sbjct: 70  DHEGGRVQRFKTDGFTHLPAMRKLGALWDKDVLAATKAATDVGYVLAAELRACGVDLSFT 129

Query: 128 PVLDLDYGVSTVIGDRAFHRDARVVTLLAKSLNHGLALAGMANCGKHFPGHGFVTADSHV 187
           PVLDLDYG S VIGDRAFHRDARVVT+LAKSLNHGL LAGM NCGKHFPGHGFV ADSH+
Sbjct: 130 PVLDLDYGESGVIGDRAFHRDARVVTMLAKSLNHGLMLAGMLNCGKHFPGHGFVKADSHL 189

Query: 188 AIPVDERALEAILGEDATPYDWLGMSLAAVMPAHVIYPKVDAQPAGFSKVWLSMLRERFG 247
            IPVDER L+ IL  DA PYDWLG+SLA VMPAHVIYPKVD  PAGFS+ WL+MLR+ FG
Sbjct: 190 EIPVDERELKQILAADAAPYDWLGLSLAGVMPAHVIYPKVDKHPAGFSRKWLTMLRKDFG 249

Query: 248 FQGVIFSDDLSMHGASVAGGPLQAAQAALDAGCDVALICNSTDKADAILAGLQGGTDAA- 306
           F G+IFSDDLSM GASVAG  +  A AAL AGCD+ LICNS DKAD +LAGLQ   + A 
Sbjct: 250 FDGLIFSDDLSMEGASVAGTVIDGAHAALQAGCDMVLICNSPDKADQLLAGLQVRDNKAT 309

Query: 307 --SAARRATLLPCGEALGWDALQADPRYL 333
             SA R A L P   AL WDALQ D RY+
Sbjct: 310 QESAVRIAALTPQSPALTWDALQQDARYI 338


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.137    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 797,740
Number of extensions: 32142
Number of successful extensions: 81
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 80
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 258
Effective length of database: 910,473
Effective search space: 234902034
Effective search space used: 234902034
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 130 (54.7 bits)