BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1794.p (413 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152979820|ref|YP_001353050.1| 3-oxoacyl-[acyl-carrier-protein... 685 0.0 gi|152983071|ref|YP_001352710.1| 3-oxoacyl-acyl carrier protein ... 354 5e-99 gi|152983044|ref|YP_001352609.1| 3-oxoacyl-(acyl-carrier-protein... 351 5e-98 >gi|152979820|ref|YP_001353050.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Janthinobacterium sp. Marseille] Length = 413 Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/413 (82%), Positives = 389/413 (94%) Query: 1 LSRTRERRVVITGLGCISPVGNNVADTWSAIKEGKSGIATVTKFDATPFTTHFAGEVKGF 60 +SR+ +RRVV+TGLGCISPVGN VAD W+++ G+SGIAT+TKFDA+PF+THFAGEVK F Sbjct: 1 MSRSSKRRVVVTGLGCISPVGNTVADAWNSLLAGQSGIATITKFDASPFSTHFAGEVKNF 60 Query: 61 NIEDYIPAKEARHMDTFIHFGMAAGIQAMQDSGLVVTDENAERIGVMIGSGIGGLPLIEE 120 NIEDYIPAKEARHMDTFIH+G+AAG+QAM+DSGLVVT+ENAERIGV++GSGIGGLPLIE+ Sbjct: 61 NIEDYIPAKEARHMDTFIHYGVAAGMQAMRDSGLVVTEENAERIGVIVGSGIGGLPLIED 120 Query: 121 THAELTNRGPRRISPFFIPASIINMISGNLSIKFGLKGPNLAIVTACTTGLHCIGSAARM 180 THAELTNRGPRRISPFF+PASIINMISG+LSI +GLKGPNLAIVTACTTGLH IG+A RM Sbjct: 121 THAELTNRGPRRISPFFVPASIINMISGHLSIIYGLKGPNLAIVTACTTGLHSIGAAGRM 180 Query: 181 IMYGDADVMVAGGAESSVSPLGIGGFASARALSTRNDDPATASRPWDKDRDGFVLGEGAG 240 I YGDADVM+AGGAES++SPLG+GGFASARALS+RNDDPATASRPWDKDRDGFVLGEGAG Sbjct: 181 IEYGDADVMIAGGAESTISPLGLGGFASARALSSRNDDPATASRPWDKDRDGFVLGEGAG 240 Query: 241 VLVLEEYEHAKARGAKIYAELLGFGMSGDAYHMTAPNLDGPRRCVLNALRDAGINADEVQ 300 V+VLEEYEHAKARGAKIYAEL+GFGMSGDAYH+TAPN+DGPRR + NAL+ A I AD+VQ Sbjct: 241 VMVLEEYEHAKARGAKIYAELVGFGMSGDAYHITAPNMDGPRRSMTNALKSAEIAADQVQ 300 Query: 301 YLNAHGTSTPLGDKNESDAIKAAFGDHAYKMVVNSTKSMTGHLLGGAGGLETVLTVLAVH 360 YLNAHGTSTPLGDKNE+DA+KAAFG HA K+ VNSTKSMTGHLLGGAGGLE+V TVLA+H Sbjct: 301 YLNAHGTSTPLGDKNETDAVKAAFGAHAKKLTVNSTKSMTGHLLGGAGGLESVFTVLALH 360 Query: 361 NQVSPPTMNIFNQDPECDLDYCANQARDMKIDIAVKNSFGFGGTNGTLVIGKM 413 +Q+SPPT+NIFNQDPECDLDYCAN AR++ I A+KN+FGFGGTNGTL+ GK+ Sbjct: 361 HQISPPTINIFNQDPECDLDYCANNAREIPIQYAMKNNFGFGGTNGTLIFGKV 413 >gi|152983071|ref|YP_001352710.1| 3-oxoacyl-acyl carrier protein synthase II [Janthinobacterium sp. Marseille] Length = 437 Score = 354 bits (909), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 191/424 (45%), Positives = 272/424 (64%), Gaps = 14/424 (3%) Query: 2 SRTRERRVVITGLGCISPVGNNVADTWSAIKEGKSGIATVTKFDATPFTTHFAGEVK--- 58 ++ R+RRVV+TG+G +SP+G+ V WS + G SG+ + + G V Sbjct: 12 NKPRQRRVVVTGMGMVSPLGSGVEIVWSRLLSGSSGLRRLDENMTAGIDAKVGGVVPSIA 71 Query: 59 -----GFNIEDYIPAKEARHMDTFIHFGMAAGIQAMQDSGLV-VTDENAERIGVMIGSGI 112 GF+ + ++ +K+ R MD FI + +AA +A++++ T+ ER +I SGI Sbjct: 72 EDQNGGFDPDRHVSSKDQRKMDKFIVYAIAASEEALREAAWQPTTERQKERTATIIASGI 131 Query: 113 GGLPLIEETHAELTNRGPRRISPFFIPASIINMISGNLSIKFGLKGPNLAIVTACTTGLH 172 GG P I +GP R+SPF IP+ +IN+ +G++SIK+G KGP A VTAC + Sbjct: 132 GGFPAIANAVRVTDTKGPNRLSPFTIPSFLINLAAGHVSIKYGFKGPIAAPVTACAASVQ 191 Query: 173 CIGSAARMIMYGDADVMVAGGAESSVSPLGIGGFASARALSTR-NDDPATASRPWDKDRD 231 IG AARMI G+ADV + GGAE+++ + +GGF++ARALST ND+P ASRP+D+ RD Sbjct: 192 AIGDAARMIRNGEADVALCGGAEAAIDRVSLGGFSAARALSTNFNDEPCAASRPFDQARD 251 Query: 232 GFVLGEGAGVLVLEEYEHAKARGAKIYAELLGFGMSGDAYHMTAPNLDGP--RRCVLNAL 289 GFV+GEGAG+LVLE+ +HA ARGAK AEL+G+G + DAYH+TA DG R + AL Sbjct: 252 GFVMGEGAGILVLEDLDHALARGAKPIAELIGYGTTADAYHITAGPTDGSGAARAMAIAL 311 Query: 290 RDAGINADEVQYLNAHGTSTPLGDKNESDAIKAAFGDHAYKMVVNSTKSMTGHLLGGAGG 349 AGI A +VQ+LNAH TSTP+GD E AIKA FG + + V STKS TGHLLG AGG Sbjct: 312 EQAGITAADVQHLNAHATSTPVGDAGELAAIKAVFGT-SNSIAVTSTKSATGHLLGAAGG 370 Query: 350 LETVLTVLAVHNQVSPPTMNIFNQDPECD-LDYCANQARDMKIDIAVKNSFGFGGTNGTL 408 +E + +LA+ +Q+ P T+N+ +D + +D AR+M I+ A+ N FGFGG N ++ Sbjct: 371 VEAIFAILALRDQIVPATLNLETKDIDATGVDIVNGIARNMDIEHAMSNGFGFGGVNASV 430 Query: 409 VIGK 412 + + Sbjct: 431 LFKR 434 >gi|152983044|ref|YP_001352609.1| 3-oxoacyl-(acyl-carrier-protein) synthase II [Janthinobacterium sp. Marseille] Length = 438 Score = 351 bits (900), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 195/425 (45%), Positives = 270/425 (63%), Gaps = 16/425 (3%) Query: 2 SRTRERRVVITGLGCISPVGNNVADTWSAIKEGKSGIATVTKFDATP---------FTTH 52 + + RR+V+TG+G +SP+G+ V WS + G+SGI + + D T T Sbjct: 12 AHQKHRRIVVTGMGIVSPLGSGVETVWSRLLAGQSGIRRLEE-DVTDGIEAKVGGVVPTS 70 Query: 53 FAGEVKGFNIEDYIPAKEARHMDTFIHFGMAAGIQAMQDSGLVVTDE-NAERIGVMIGSG 111 GF+ + ++ +K+ R MD FI + + A +A++ + T E ER ++ SG Sbjct: 71 LEDPAGGFDPDQHVSSKDQRKMDKFIMYALVASEEALRQADWHPTTEAEKERTATVVASG 130 Query: 112 IGGLPLIEETHAELTNRGPRRISPFFIPASIINMISGNLSIKFGLKGPNLAIVTACTTGL 171 IGG P I +GP R+SPF IP+ +IN+ +G++SIK G KGP A VTAC + Sbjct: 131 IGGFPAIANAVRVTDKKGPNRLSPFTIPSFLINLAAGHISIKHGFKGPIAAPVTACAASV 190 Query: 172 HCIGSAARMIMYGDADVMVAGGAESSVSPLGIGGFASARALSTR-NDDPATASRPWDKDR 230 IG AARMI +ADV++ GGAE+++ + +GGFA+ARALST NDDP TASRP+D +R Sbjct: 191 QAIGDAARMIRNEEADVVLCGGAEAAIDRVSLGGFAAARALSTNFNDDPTTASRPFDDER 250 Query: 231 DGFVLGEGAGVLVLEEYEHAKARGAKIYAELLGFGMSGDAYHMTAPNLDGPRRCVLN--A 288 DGFV+GEGAG+L+LEE HA ARGAK AEL+G+G + DAYHMTA DG A Sbjct: 251 DGFVMGEGAGILILEELSHALARGAKPIAELIGYGTTADAYHMTAGPADGGGAARAMSIA 310 Query: 289 LRDAGINADEVQYLNAHGTSTPLGDKNESDAIKAAFGDHAYKMVVNSTKSMTGHLLGGAG 348 L+ AGI A +VQ+LNAH TSTP+GD E AIKA FG ++ V STKS TGHLLG AG Sbjct: 311 LQQAGIIATDVQHLNAHATSTPVGDAGELAAIKAVFGTD-NRIAVTSTKSATGHLLGAAG 369 Query: 349 GLETVLTVLAVHNQVSPPTMNIFNQDPECD-LDYCANQARDMKIDIAVKNSFGFGGTNGT 407 G+E + T+LA+ +QV P T+N+ D + +D + AR+MKI+ A+ N FGFGG N + Sbjct: 370 GVEAIFTILALRDQVVPATLNLKTIDSGANGIDIVTHSARNMKIEHAMSNGFGFGGVNAS 429 Query: 408 LVIGK 412 ++ + Sbjct: 430 VLFKR 434 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.318 0.136 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,038,807 Number of extensions: 46259 Number of successful extensions: 154 Number of sequences better than 1.0e-08: 3 Number of HSP's gapped: 138 Number of HSP's successfully gapped: 3 Length of query: 413 Length of database: 1,221,021 Length adjustment: 86 Effective length of query: 327 Effective length of database: 903,079 Effective search space: 295306833 Effective search space used: 295306833 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)