BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1774.p
         (303 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152983022|ref|YP_001352268.1| DNA adenine methylase [Janthino...    65   5e-12

>gi|152983022|ref|YP_001352268.1| DNA adenine methylase
           [Janthinobacterium sp. Marseille]
          Length = 276

 Score = 65.1 bits (157), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 17/194 (8%)

Query: 7   VIPYQGSKRKLAEDILSYMDVDIETLYEPFVGSGAITLAAAANNKAKKFVVADKLEPLAE 66
           +I + G KR L + I  Y+       YEPF G GA+  A   +    K  ++DK   L  
Sbjct: 18  LIKWPGGKRALLKHITPYIPNTYGRYYEPFFGGGALFFALNPD----KASLSDKNFELIN 73

Query: 67  LWKWIVTQPERLTAEYATLWNEQLSDPAGYYRKVRD--DFNQTQSPSDLLYLVARCVKNA 124
           L+  +  QP  L  +  T  N +      YYR +R+    +  +S + L+YL        
Sbjct: 74  LYSQVKEQPRSLIKKLKTFKNSE----DDYYR-IRELRPADPVESAARLMYLCNLSFNGI 128

Query: 125 VRFNGHGQFNQGPDNRRLGLKPDKLKREVALASKLLKDRVKIVGGDFRDAIADATPDDLV 184
            R N  G FN  P  R+  + P   +R + ++S L    V +   DF  +++ A   D V
Sbjct: 129 HRVNLKGDFNV-PYGRKTHIDPCPEERILQISSAL--KNVTLRCDDFATSVSRAKAGDFV 185

Query: 185 YMDPPW---QGTSG 195
           Y DPP+    GT+G
Sbjct: 186 YFDPPYTVAHGTNG 199


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 687,955
Number of extensions: 26353
Number of successful extensions: 78
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 220
Effective length of database: 914,170
Effective search space: 201117400
Effective search space used: 201117400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 129 (54.3 bits)