BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1770.p
         (780 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152979986|ref|YP_001352844.1| FtsK/SpoIIIE family DNA segrega...  1203   0.0  

>gi|152979986|ref|YP_001352844.1| FtsK/SpoIIIE family DNA
           segregation ATPase [Janthinobacterium sp. Marseille]
          Length = 777

 Score = 1203 bits (3113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/778 (79%), Positives = 674/778 (86%), Gaps = 5/778 (0%)

Query: 1   MSKTSQAHIRTTK-TPAPPMPNRLVRLLSEARWLALLALLAYLALILLSYSKTDPGWSVA 59
           M+KTSQA+ R T  T APP+P RLVRLLSEARWL L AL  YL LI L+YS  DPGWS A
Sbjct: 1   MTKTSQAYTRKTDATKAPPLPGRLVRLLSEARWLILAALTLYLILIFLTYSPVDPGWSHA 60

Query: 60  SAVPRVGNWGGRVGAWTADLMLYIFGLSAWWWCVLVGRSVWTGYRRLSNRFLVAQPVEPE 119
           + V ++ N GGRVGAW ADL+L+IFGLSAWW C+ + R VW GYRRLS RFL+ +  EPE
Sbjct: 61  NVVAKLNNVGGRVGAWMADLLLFIFGLSAWWICIFLLRHVWVGYRRLSQRFLLKKEPEPE 120

Query: 120 HQQEPLIRAVGFVFMLTGSMGIEFTRMHRFAPKLPHSSGGVLGEMIGTAMQPTFGFTGST 179
           H QE LIR +GF  ++ GS+ +E+ RMH     LP S GGVLGE+IG+A Q TFGF G+T
Sbjct: 121 HHQEGLIRGIGFFLLMIGSVALEYLRMHSLKAALPRSPGGVLGELIGSAAQSTFGFMGAT 180

Query: 180 LLLLLLFGLGFSLLFQVSWLAAVERIGGLIEDGLFAVRDFFAARADRRAGQEAAVKREET 239
           LLLLL+FGLGFSL F VSWL   ERIG  IE    AVR+ + AR DR+ G  AAVKREE 
Sbjct: 181 LLLLLVFGLGFSLFFHVSWLGVAERIGETIELAFQAVRNLYGAREDRKVGVVAAVKREEV 240

Query: 240 VVQERAKIVEAPPIRIEPQIVEVQKSDRVQKEKQTSLFDDL-NSELPPLSLLDEAPPAQQ 298
           VV ERAKIV+APPIRIEPQI+ V KS+RV+KE+Q SLF+DL ++ LPPLSLLDEAP +Q+
Sbjct: 241 VVNERAKIVDAPPIRIEPQIIAVPKSERVEKERQVSLFNDLPDTNLPPLSLLDEAPQSQE 300

Query: 299 TVSVETLEFTSRLIEKKLADFGVEVKVVAAYPGPVITRYEIEPATGVKGSQIVNLARDLA 358
           TVS+ETLEFTSRLIEKKL+DFG+ VKVVAAYPGPV+TRYEIEPATGVKGSQIV LARDLA
Sbjct: 301 TVSIETLEFTSRLIEKKLSDFGIVVKVVAAYPGPVVTRYEIEPATGVKGSQIVGLARDLA 360

Query: 359 RSLSLTSIRVVEVIQGKNYMGLELPNPKRQIVRLTEILGSKVYNDSHSSLTVALGKDIAG 418
           RSLSLTSIRVVE I GKNYM LELPNPKRQIVRLTEI+ SKVYNDS SSLTVALGKDIAG
Sbjct: 361 RSLSLTSIRVVETIPGKNYMALELPNPKRQIVRLTEIVSSKVYNDSSSSLTVALGKDIAG 420

Query: 419 NPVVADLAKMPHLLVAGTTGSGKSVGINATILSLLYKSSPRQVRLILIDPKMLELSIYEG 478
           NPVVADLAKMPHLLVAGTTGSGKSVGINATILSLLYKS P QVRLILIDPKMLELSIYEG
Sbjct: 421 NPVVADLAKMPHLLVAGTTGSGKSVGINATILSLLYKSDPNQVRLILIDPKMLELSIYEG 480

Query: 479 IPHLLAPVVTDMRQAGHALNWAVEEMERRYKKMSKLGVRNLAGYNQKIADADKRGEKIPN 538
           IPHLLAPVVTDMRQAGHALNW V EMERRYK MSKLGVRNLAGYN KIA+A+K  +KIPN
Sbjct: 481 IPHLLAPVVTDMRQAGHALNWGVNEMERRYKLMSKLGVRNLAGYNTKIAEAEKNEQKIPN 540

Query: 539 PFSLTPDAPEPLEQLETIVIIIDELADLMMVVGKKVEELIARIAQKARAAGIHLILATQR 598
           PFSLTPDAPEPLE+L TIVIIIDELADLMMVVGKKVEELIARIAQKARAAGIHLILATQR
Sbjct: 541 PFSLTPDAPEPLEKLPTIVIIIDELADLMMVVGKKVEELIARIAQKARAAGIHLILATQR 600

Query: 599 PSVDVITGLIKANVPTRIAFQVSSKIDSRTILDQMGAETLLGMGDMLYNPPGTGLPVRVH 658
           PSVDVITGLIKAN+PTRIAFQVSSKIDSRTILDQMGAE LLGMGDMLY PPGTGLPVRVH
Sbjct: 601 PSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQMGAEALLGMGDMLYMPPGTGLPVRVH 660

Query: 659 GAFVSDDEVHRVVEHLKSQGEPNYIEGILEGGVLEDAEGGGGSGAAAGAGGGEGDEMYDQ 718
           GAFVSD+EVHRVV+HLK+QGEPNYIEGILEGGV ED   G  S  A G  GGE D +YDQ
Sbjct: 661 GAFVSDEEVHRVVDHLKAQGEPNYIEGILEGGVAED---GDLSLGAEGGAGGEADALYDQ 717

Query: 719 AVAVVLKHRRASISLVQRHLRIGYNRAARLLEQMEQSGLVSTMQSNGNREILVPAGAS 776
           AVA+VLK+RRASISLVQRHLRIGYNRAARLLEQMEQSGLVSTMQSNGNREILVPAG +
Sbjct: 718 AVAIVLKNRRASISLVQRHLRIGYNRAARLLEQMEQSGLVSTMQSNGNREILVPAGNT 775


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.135    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,596,179
Number of extensions: 62651
Number of successful extensions: 227
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 224
Number of HSP's successfully gapped: 1
Length of query: 780
Length of database: 1,221,021
Length adjustment: 91
Effective length of query: 689
Effective length of database: 884,594
Effective search space: 609485266
Effective search space used: 609485266
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 133 (55.8 bits)