BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1756.p
         (254 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981473|ref|YP_001353041.1| uroporphyrin-III C/tetrapyrrole...   385   e-108
gi|152981090|ref|YP_001351892.1| hypothetical protein mma_0202 [...    69   3e-13

>gi|152981473|ref|YP_001353041.1| uroporphyrin-III C/tetrapyrrole
           (corrin/porphyrin) methyltransferase [Janthinobacterium
           sp. Marseille]
          Length = 251

 Score =  385 bits (990), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/254 (74%), Positives = 216/254 (85%), Gaps = 4/254 (1%)

Query: 1   MPGILYLVPNTLGSTELPTDTDAAHPLEAIIPRQVQAIAARLDYFVAENAKTTRAFLKLL 60
           MPGILYL+PNTLG T++  DTD   PL  IIP+ VQ I ARLDYFVAENAKTTRAFLKL+
Sbjct: 1   MPGILYLIPNTLGETQV-ADTD---PLAHIIPQDVQNITARLDYFVAENAKTTRAFLKLI 56

Query: 61  GSNTPLTKPIQEIQISELNVNTPATALPALLAPLLAGRDGGLISEAGVPAVADPGANLVR 120
           G+   L KPIQEI+I+ELNVNT A ALPALL P+LAG+D GLISEAGVPAVADPGANLVR
Sbjct: 57  GTRNTLAKPIQEIRIAELNVNTEAKALPALLEPMLAGQDAGLISEAGVPAVADPGANLVR 116

Query: 121 LAHQHGIQVRPLVGPSSLLLAVMASGLNGQSFAFNGYLPTDAEARAKRIRQLEDRSRKEK 180
           LAH  GIQV+PLVGPSSLLLAVMASGL+GQ+FAFNGYLP DA AR+KRI+QLEDRSR+EK
Sbjct: 117 LAHARGIQVKPLVGPSSLLLAVMASGLSGQNFAFNGYLPIDAAARSKRIKQLEDRSRQEK 176

Query: 181 QTQLLIETPYRNGAMLEALAQACQPGTLICVATDLSLPSESVRTQTAAQWKAALAAHKAP 240
           QTQ  IETPYRN  +LE L   C P TL+ +ATDL+L SE+++TQTAA+WKA LA+ K P
Sbjct: 177 QTQFFIETPYRNAGLLETLVNTCNPNTLLSIATDLTLSSEAIKTQTAARWKADLASGKTP 236

Query: 241 DFHKKPTVFLLLAE 254
           DFHKKPTVFLLLA+
Sbjct: 237 DFHKKPTVFLLLAD 250


>gi|152981090|ref|YP_001351892.1| hypothetical protein mma_0202
           [Janthinobacterium sp. Marseille]
          Length = 307

 Score = 68.9 bits (167), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 6/162 (3%)

Query: 90  LLAPLLAGRDGGLISEAGVPAVADPGANLVRLAHQHGIQVRPLVGPSSLLLAVMASGLNG 149
           L+A L AG    L+S+AG PAV+DPGA +V      G++V PL G S+ + A+ ASGL  
Sbjct: 91  LIARLQAGERIALVSDAGTPAVSDPGARIVDAVRNAGLRVIPLPGASAAVTALSASGLLN 150

Query: 150 QSFAFNGYLPTDAEARAKRIRQLEDRSRKEKQTQLLIETPYRNGAMLEALAQACQPGTLI 209
             F F G+LP  A+ R   +  L+  +     T +  E P+R    + ALA A +    I
Sbjct: 151 DQFYFVGFLPAKAKQRETFLFGLQAIA----ATMVFYEAPHRITETVAALAAAFELTRHI 206

Query: 210 CVATDLSLPSESVRTQTAAQWKAALAAHKAPDFHKKPTVFLL 251
             A +L+   E     T A+    + A   P+  K   V LL
Sbjct: 207 VFARELTKLFEETHRCTLAEAVTWINAD--PNRQKGEFVVLL 246


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.132    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 505,234
Number of extensions: 17660
Number of successful extensions: 63
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 62
Number of HSP's successfully gapped: 2
Length of query: 254
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 173
Effective length of database: 921,564
Effective search space: 159430572
Effective search space used: 159430572
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)