BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1755.p
         (348 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980027|ref|YP_001353040.1| U7 family peptidase [Janthinoba...   442   e-125
gi|152981533|ref|YP_001354400.1| phage related peptidase [Janthi...    78   9e-16
gi|152981575|ref|YP_001354459.1| hypothetical protein mma_2769 [...    57   1e-09

>gi|152980027|ref|YP_001353040.1| U7 family peptidase
           [Janthinobacterium sp. Marseille]
          Length = 334

 Score =  442 bits (1137), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/326 (65%), Positives = 262/326 (80%), Gaps = 13/326 (3%)

Query: 3   NNESENQQAQPPQSSASPASAPPPSSIPASVREDKKSGWERDVLEKLALFAVKEQRARRR 62
           +N+++N   QP    AS A+AP            KK GWER+VLEKLA   +KEQRARRR
Sbjct: 2   SNDNDNLN-QPSAWQASTAAAP------------KKEGWEREVLEKLAFATLKEQRARRR 48

Query: 63  WGIFFRIAILAVIVMGGWLAFTYNKIESEPLGPHTALVEIKGAIDSEGQGSAAVVIPALD 122
           WGIFF+   +A+I    W++F  +  + E +GPHTAL++I G I+++G G A  VI AL 
Sbjct: 49  WGIFFKFVTVALIAFALWMSFGPSVGDMENVGPHTALIKIDGTIEAKGAGDADSVISALT 108

Query: 123 KAFAASDSVGVILKINSPGGSPVQAGMINDEITRLRKEYPKKPIYVVVEEMCASGGYYIA 182
           KA+A   SVG+IL+INSPGGSPVQAG+INDE+TRLRK+YP+KP+YVVV EMCASGGYYIA
Sbjct: 109 KAYADPGSVGLILQINSPGGSPVQAGIINDEMTRLRKKYPQKPLYVVVNEMCASGGYYIA 168

Query: 183 VAADKIFVNKASLIGSVGVLMDGFGFTGLMDKLGVERRLLTAGENKSFLDPFSPQSPKQR 242
           VAAD+I+VNKASL+GS+GVLMDGFGFTG M+KLGVERR+LTAG NK F+DPFSPQ+  Q+
Sbjct: 169 VAADRIYVNKASLVGSIGVLMDGFGFTGTMEKLGVERRMLTAGNNKGFMDPFSPQTETQK 228

Query: 243 EYALSMLEEIHQQFIEVVRQGRGTRLKETPDTFSGLVWTGSKAVELGLADGFGTVDSVAR 302
            YA  ML EIHQQFI+VVR+GRG RLKETP+TFSGLVWTG+K++ELGLADGFGTV+SVAR
Sbjct: 229 HYAQDMLNEIHQQFIDVVRKGRGKRLKETPETFSGLVWTGAKSIELGLADGFGTVESVAR 288

Query: 303 DVIKAEDVVDYTQTENLSERVLKKFG 328
           D  K+ ++VDYTQ E LS+RVL+KFG
Sbjct: 289 DEFKSTNIVDYTQREGLSDRVLRKFG 314


>gi|152981533|ref|YP_001354400.1| phage related peptidase
           [Janthinobacterium sp. Marseille]
          Length = 406

 Score = 77.8 bits (190), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 4/180 (2%)

Query: 121 LDKAFAASDSVGVILKINSPGGSPVQAGMINDEITRLRKEYPKKPIYVVVEEMCASGGYY 180
           LD A A  +   ++L I+S GG   ++G + D   R+     +KP++ +  +M  S  Y 
Sbjct: 90  LDTAVADPNVAAILLDIDSAGG---ESGGVFDLADRVAAAAKRKPVWALANDMAFSAAYA 146

Query: 181 IAVAADKIFVNKASLIGSVGVLMDGFGFTGLMDKLGVERRLLTAGENKSFLDPFSPQSPK 240
           I  AA +  V +   +GS+GV+      +    K GV    + AG  K+ L+P  P S +
Sbjct: 147 IGSAASRFIVTRTGGVGSIGVIAMHADQSVKDAKDGVRYTTVFAGARKNDLNPHEPISDE 206

Query: 241 QREYALSMLEEIHQQFIEVVRQGRGTRLKETPDTFSGLVWTGSKAVELGLADGFGTVDSV 300
              +  + +E ++  F+E V + RG        T +  ++ G+ AV  GLAD  GT D V
Sbjct: 207 AHAFLKNEVERVYGLFVETVARNRGVSADAVRATEAS-IYYGADAVAAGLADAVGTFDDV 265


>gi|152981575|ref|YP_001354459.1| hypothetical protein mma_2769
           [Janthinobacterium sp. Marseille]
          Length = 435

 Score = 57.4 bits (137), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 4/180 (2%)

Query: 121 LDKAFAASDSVGVILKINSPGGSPVQAGMINDEITRLRKEYPKKPIYVVVEEMCASGGYY 180
           LD A A     G++L ++SPGG   +A  + +   R+R     KPI+    +   S  + 
Sbjct: 90  LDAALADPQVAGILLDLDSPGG---EASGVFELAERIRAASTIKPIWAHANDAAYSAAFA 146

Query: 181 IAVAADKIFVNKASLIGSVGVLMDGFGFTGLMDKLGVERRLLTAGENKSFLDPFSPQSPK 240
           IA A  ++ +++ + +GS+GV+      +    K G+    + AG +K+   P  P SP+
Sbjct: 147 IAAACQRLTLSQTAGVGSIGVIALHVDQSVKDAKDGLNYTAVFAGSHKNDFSPHEPLSPQ 206

Query: 241 QREYALSMLEEIHQQFIEVVRQGRGTRLKETPDTFSGLVWTGSKAVELGLADGFGTVDSV 300
                 + ++ ++  F+  V Q RG        T +GL + G +AV  GLAD     D+V
Sbjct: 207 AITALQTEVDRLYDIFVNQVGQMRGLDPDAVRATEAGLFY-GEQAVAAGLADAVMPFDAV 265


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.316    0.133    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 775,751
Number of extensions: 34001
Number of successful extensions: 100
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 97
Number of HSP's successfully gapped: 3
Length of query: 348
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 264
Effective length of database: 910,473
Effective search space: 240364872
Effective search space used: 240364872
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 130 (54.7 bits)