BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1753.p
         (219 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981553|ref|YP_001353038.1| phosphoglycolate phosphatase [J...   355   1e-99
gi|152981556|ref|YP_001354369.1| phosphoglycolate phosphatase [J...    56   2e-09

>gi|152981553|ref|YP_001353038.1| phosphoglycolate phosphatase
           [Janthinobacterium sp. Marseille]
          Length = 219

 Score =  355 bits (911), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 168/219 (76%), Positives = 190/219 (86%)

Query: 1   MARKQFDLIVFDWDGTLMDSTSTIVRCIQAAARDLGLPIPDKSAASYVIGLGLLDAMQAA 60
           MARKQFDLIVFDWDGTLMDST+ IV CIQAAA+DLGLPIP + AA++VIGL L  AM+AA
Sbjct: 1   MARKQFDLIVFDWDGTLMDSTAVIVNCIQAAAKDLGLPIPGEKAAAHVIGLSLQKAMEAA 60

Query: 61  IPDVDPKYYPRIVERYRHHYLGQDKDLTLFEGVPEMLADLSQQGYFLAVATGKSRVGLNR 120
           +P +DPKYYPR+VERYR+HYL QD  LTLF+GV EML DLSQQGYFLAVATGKSRVGLNR
Sbjct: 61  LPGIDPKYYPRMVERYRYHYLNQDGGLTLFKGVREMLEDLSQQGYFLAVATGKSRVGLNR 120

Query: 121 AMNTTGLLSKFDATRCADETFSKPHPAMLQELTRELGQDMHRTLMIGDTTHDLQMAINAG 180
           A++ + LLS FDATRCADETFSKPHPAMLQELTRELGQDM RT+M+GDTTHDL +A NAG
Sbjct: 121 ALDVSKLLSLFDATRCADETFSKPHPAMLQELTRELGQDMKRTVMVGDTTHDLLLAQNAG 180

Query: 181 AKGVAVEFGAHPPQQLQTLSPLYSARSIRELHQWLNEHA 219
           A GVAV +GAH P +L  L+PLYSA S+ ELH WLNE+ 
Sbjct: 181 AAGVAVHYGAHTPAELTALNPLYSATSVPELHSWLNENG 219


>gi|152981556|ref|YP_001354369.1| phosphoglycolate phosphatase
           [Janthinobacterium sp. Marseille]
          Length = 219

 Score = 55.8 bits (133), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 84/214 (39%), Gaps = 29/214 (13%)

Query: 9   IVFDWDGTLMDSTSTIVRCIQA--AAR-----DLGLPIPDKSAASYVIGLGLLDAMQAAI 61
           I+FD DGTL D+   +   +     AR     D  L  P  SA +     GL+ A     
Sbjct: 9   ILFDLDGTLADTAPDLAGAVNQLRIARGLEPTDYELLRPTASAGAR----GLIGAAFGLT 64

Query: 62  PDVDPKYYPRIVERYRHHYLGQDK-DLTLFEGVPEMLADLSQQGYFLAVATGKSRVGLNR 120
           P      YP + + +  +Y      +  LF+GV E+LA L  +G    + T K     +R
Sbjct: 65  PQ--DAEYPELRDAFLKNYEQSIAVESRLFDGVTELLAQLQAEGIVWGIVTNKVSYLTDR 122

Query: 121 AMNTTGLLSKFDATRCADETFSKPHPAMLQELTRELGQDMHRTLMIGDTTHDLQMAINAG 180
            +   GL            +  KPHPA L E  + +G D      +GD   D+Q    AG
Sbjct: 123 LVPQIGLDHAACVISGDTASHPKPHPAPLFEAAKRIGIDPEHCWYVGDDLRDIQAGQAAG 182

Query: 181 AKGVAVEFG---------------AHPPQQLQTL 199
              +A  +G               A  P+QL TL
Sbjct: 183 MTTIAAGWGYCGNIAPASWNADALAESPEQLFTL 216


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.135    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 518,709
Number of extensions: 21273
Number of successful extensions: 89
Number of sequences better than 1.0e-08: 3
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 3
Length of query: 219
Length of database: 1,221,021
Length adjustment: 80
Effective length of query: 139
Effective length of database: 925,261
Effective search space: 128611279
Effective search space used: 128611279
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 127 (53.5 bits)