BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1745.p
         (832 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980993|ref|YP_001353032.1| ABC-type transport system invol...  1105   0.0  

>gi|152980993|ref|YP_001353032.1| ABC-type transport system involved
           in lysophospholipase L1 biosynthesis, permease component
           [Janthinobacterium sp. Marseille]
          Length = 833

 Score = 1105 bits (2857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/834 (67%), Positives = 676/834 (81%), Gaps = 3/834 (0%)

Query: 1   MFQQALRMTLRDWRTGELRFLLIALVVAVAALSSVGFFVDRMRAGMTRDAHQLLGADLLI 60
           MF Q+LRMT RDWR GELRFLL++L+VAVAALSSVGFFVDRMRAG+ RDAHQLLGADL+I
Sbjct: 1   MFLQSLRMTQRDWRAGELRFLLVSLIVAVAALSSVGFFVDRMRAGLNRDAHQLLGADLVI 60

Query: 61  AADQPLPPTWLQQAAQAGLLQAQTQVFPSMAQAGEGDAARSVLASIKAVTAGYPLRGQLT 120
            AD+P+     ++A Q GL  A T VFPSMA AGEG+ A S LASIKAVT GYPLRG+L 
Sbjct: 61  RADEPIAAAMRKEAQQRGLQLADTTVFPSMAIAGEGEQAVSKLASIKAVTTGYPLRGKLK 120

Query: 121 LRADD--GRDRPAQGIPQPGTVWVDPQILSQLDVKVGDTLKLGDLPVKIAALISVEPDRG 178
           + +D   G       IP  GTVWVDP IL  L+V VG  LKLGD    IA +++ EPDRG
Sbjct: 121 V-SDTLVGEGEVTDTIPATGTVWVDPGILESLNVAVGSPLKLGDKTFTIAKVLNFEPDRG 179

Query: 179 SAFVNFAPRVMLGEADLAATHLVQVGSRVTYRLLIAGPAEAVQRYQQQIERQIEAEQLRG 238
           + F+NFAPRVML + DLAAT+LVQ GSRV+YRLL+AG    V  + +Q++ QIE + L+G
Sbjct: 180 AGFMNFAPRVMLAQTDLAATNLVQNGSRVSYRLLLAGKQADVSAFDKQVQEQIEKQNLKG 239

Query: 239 VRLESLENGRPEMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRCF 298
           +R ESLE+GRPEMRATL+RAEQFLSLVGLLSAMLAA+AVAMAARRFMLRH+DACAMLRC 
Sbjct: 240 LRTESLESGRPEMRATLERAEQFLSLVGLLSAMLAAVAVAMAARRFMLRHVDACAMLRCL 299

Query: 299 GLTQAQVTVLYLTEFILIGTVASVIGMLLGFAAHFALLQWLGGFMPTALPPPGWAPALQG 358
           G+TQ QVT LYL EF+++G + S +G  +GFAAHF L++WLG  +   LP   + PALQG
Sbjct: 300 GMTQNQVTSLYLIEFLIVGLLGSALGAAIGFAAHFVLIEWLGRLVTNVLPAASFLPALQG 359

Query: 359 VATGLLLLVGFALPPILQLRNVPHNRVIRRDQGAPQALTVASYLLGTLVFSGLLLWQAGD 418
           +ATGLLLL+GFA+PPILQLRNVPHNRVIRR+Q  PQ +T+A+Y LG   F GLLLWQAG+
Sbjct: 360 IATGLLLLIGFAVPPILQLRNVPHNRVIRREQDMPQPITIATYALGLATFVGLLLWQAGN 419

Query: 419 LKLGLLTIAGFLGGFGLFALLAWLCLRALRALRGLVDRQSWRFAIDGLQRRPAAAVMQVV 478
           +KLGLLT AGFLGG   FA+++W  L++L++LRG+++  SWRFA+  LQRRP A V+QVV
Sbjct: 420 VKLGLLTAAGFLGGLAGFAVISWFALKSLQSLRGMINHPSWRFAVTALQRRPGATVVQVV 479

Query: 479 ALGLGLMALLLLTVIRGDLVGAWRQATPADAPNRFIINIQPDQRQAVQQALRQGGVQDVA 538
           AL LGLMALLLLTVIRGDLV AWR ATP DAPNRF+INIQP+Q+  ++  L+Q  +    
Sbjct: 480 ALALGLMALLLLTVIRGDLVAAWRSATPPDAPNRFVINIQPEQKAQIEARLKQNNIVGND 539

Query: 539 LYPMIRGRLVQINGRAITAADYQEDRAKRLVDREFNLSTMPDIPPGNGIVAGRWYDDSKP 598
           LYPMIRGRL+ ING+ IT   + EDRAKRLVDREFNLSTM  IP  N I AGRWYD+SKP
Sbjct: 540 LYPMIRGRLLAINGKEITGETFIEDRAKRLVDREFNLSTMTQIPEQNEITAGRWYDNSKP 599

Query: 599 EASVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVILNPTLMRDT 658
           EASVE GLA+TL +KLGD L+FDIAG+ V+ P+TSLRKLEWGS+RVNFFVI+NP  M+D 
Sbjct: 600 EASVEEGLAKTLNLKLGDHLKFDIAGETVDVPITSLRKLEWGSMRVNFFVIINPAAMKDM 659

Query: 659 PQSWITAVHLTPAQEALGNTLTRDFPNLTVVDIGSVLRQIQEVVGQVIAAVEFLFLFTLC 718
           PQ+WITA HL      L N LTRDFPNLTVVDIGSV++QIQ+VV QV+ AVEFLFLFTL 
Sbjct: 660 PQTWITAFHLPQTNTGLENQLTRDFPNLTVVDIGSVVKQIQDVVDQVVTAVEFLFLFTLA 719

Query: 719 SGVLVLYAALAGSQDERVREAGLLRALGATRQELSSAQRIEVLLVGSLAGLLAASGAAAI 778
           SG+LVLYAALA SQD+R REAGLLRALGATR++LS +Q IE  LVG LAGLLAA+GA A+
Sbjct: 720 SGMLVLYAALASSQDQRTREAGLLRALGATRKQLSQSQWIEFALVGGLAGLLAATGATAV 779

Query: 779 GWALAHYVFNFDWSFSPLVWVAGMGLGAACSALGGWAGLRHVLRRPPLQTLREA 832
           GW+LAH+VF+F+W FSP+VW+AG+G+GAAC+ +GGW GLRHVL++PPLQTLREA
Sbjct: 780 GWSLAHFVFDFEWIFSPVVWLAGLGIGAACAFIGGWVGLRHVLKQPPLQTLREA 833


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.325    0.139    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,636,409
Number of extensions: 62660
Number of successful extensions: 301
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 299
Number of HSP's successfully gapped: 1
Length of query: 832
Length of database: 1,221,021
Length adjustment: 91
Effective length of query: 741
Effective length of database: 884,594
Effective search space: 655484154
Effective search space used: 655484154
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 134 (56.2 bits)