BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1698.p (617 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152981020|ref|YP_001352897.1| ABC-type uncharacterized transp... 445 e-126 gi|152980901|ref|YP_001351950.1| ABC transporter ATP-binding pro... 401 e-113 gi|152981172|ref|YP_001353094.1| ABC-type oligopeptide transport... 276 2e-75 gi|152982636|ref|YP_001355208.1| ABC-type transport system, ATPa... 254 1e-68 gi|152982798|ref|YP_001353095.1| ABC-type oligopeptide transport... 231 7e-62 >gi|152981020|ref|YP_001352897.1| ABC-type uncharacterized transport system, duplicated ATPase component [Janthinobacterium sp. Marseille] Length = 533 Score = 445 bits (1145), Expect = e-126, Method: Compositional matrix adjust. Identities = 259/573 (45%), Positives = 349/573 (60%), Gaps = 60/573 (10%) Query: 7 VLDVSHLNVRFATSERTVDAVRDLSFHVDQGETLAIVGESGSGKSVSSLAIMRLIEHG-- 64 +LD+ +L V F TS+ V D+SF + GE A+VGESGSGK+V++L+++RL + Sbjct: 3 LLDIQNLQVSFDTSK----VVNDVSFSIAAGEKFALVGESGSGKTVTALSLLRLNQDATY 58 Query: 65 GGKIASGSLQFRRRSGQTLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIAE 124 GGKI GQ D+ Q A MRS+RG ++AMIFQEPMT+LNP+FT+G QIAE Sbjct: 59 GGKILF--------EGQ--DILQKTEAAMRSVRGNDVAMIFQEPMTALNPLFTIGNQIAE 108 Query: 125 SIRLHQGMSRAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPSL 184 + LH+G+S AA + +L+ IPE +R +PH+LSGG RQR MIAMAL+CKP L Sbjct: 109 VLMLHEGISARAAALRTVELLDKTGIPEPQRRALSYPHELSGGQRQRAMIAMALACKPKL 168 Query: 185 LIADEPTTALDVTIQAQILQLIRSLQEEMQMGVIFITHDMGVVAEVADRVVVMCRGEKVE 244 LIADEPTTALDVTIQ QI++L+ LQ E M V+ ITHD+ +V ADRV VM +G +E Sbjct: 169 LIADEPTTALDVTIQVQIVELLNQLQREENMAVLMITHDLNLVRHFADRVGVMEKGRLLE 228 Query: 245 ENDVQPLFAAPAHPYTQSLLAAVPRLGSMRGTDKPLRFGLAPQAEARPELIASELQAQAE 304 Q LF+AP YT+ LLA+ P Q Sbjct: 229 VATTQQLFSAPREAYTKKLLASQPH------------------------------QLVNV 258 Query: 305 IAAQRQPILKVRDLTTRFDVKSGIFGRVKQRVHAVEKVSFDLYSGETLAIVGESGCGKST 364 ++ P+LK ++ FD+K G F ++ AV++V + GETL IVGESG GKST Sbjct: 259 VSEAATPLLKAEQVSCTFDIKKGWFKKIP--FVAVDQVDVQVKPGETLGIVGESGSGKST 316 Query: 365 TGRSLLRLVDI-AGGRVEFGGRDLAQLPRSELRQLRRDIQFIFQDPFASLDPRMTV---- 419 G +LLRL G + F G+ + R LR LR +Q +FQDPFASL PR TV Sbjct: 317 LGLALLRLSGAHVKGEIAFDGQAITHQSRDALRPLRARMQIVFQDPFASLSPRRTVEQIV 376 Query: 420 --GYSIMEPML-VHGMKEGAQERVDALLTRVGLTPEHGQRYPHEFSGGQRQRICIARALA 476 G ++ +P L HG+++ + L VGL+ E RYPHEFSGGQRQRI IARAL Sbjct: 377 GEGLALHQPQLGPHGIRKAVADG----LQEVGLSAEMMTRYPHEFSGGQRQRIAIARALV 432 Query: 477 LNPKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYL 536 L P +++ DE S+LDVS+Q Q++ L+ DLQ + G+++IFISHD+AV+ ++HRV VM Sbjct: 433 LKPDLILLDEPTSSLDVSVQHQVLLLLADLQKKYGMAYIFISHDLAVIRAMAHRVMVMKD 492 Query: 537 GQIVEIGPRRAIFENPQHPYTRKLMAAVPVADP 569 G++VE G + + P PYT++L+AA A P Sbjct: 493 GRVVEQGLTQTVLSKPSEPYTQRLLAASVYARP 525 >gi|152980901|ref|YP_001351950.1| ABC transporter ATP-binding protein [Janthinobacterium sp. Marseille] Length = 579 Score = 401 bits (1030), Expect = e-113, Method: Compositional matrix adjust. Identities = 242/566 (42%), Positives = 344/566 (60%), Gaps = 23/566 (4%) Query: 2 QQSQRVLDVSHLNVRFATSERTVDAVRDLSFHVDQGETLAIVGESGSGKSVSSLAIMRLI 61 Q + +++V +L+VRF V ++ +SF + +GE LA+VGESGSGKSV+S ++ L Sbjct: 7 QARRPLVEVENLHVRFGHGGPAV--IKGISFALHRGECLALVGESGSGKSVTSRTLVGLT 64 Query: 62 EHGGGKIASGSLQFRRRSGQTLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQ 121 H SLQ R S DL + + T R IRG I + Q+ + SL+P+ TVG + Sbjct: 65 GH------RSSLQADRLSFDGDDLRRFNERTWRDIRGRRIGFVMQDALGSLDPLRTVGAE 118 Query: 122 IAESIRLHQGMSRAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCK 181 +AE ++LH +++ + + + +L V IP+ + L ++PHQLSGG+RQR +IA A++C Sbjct: 119 VAEPLKLHAKLTKQEREEKVIALLHSVGIPQPESRLMQYPHQLSGGLRQRALIASAIACN 178 Query: 182 PSLLIADEPTTALDVTIQAQILQLIRSLQEEMQMGVIFITHDMGVVAEVADRVVVMCRGE 241 P LLIADEPTTALD +QAQ+L L+ SL+ ++ ++HD VV+ +ADRV VM GE Sbjct: 179 PELLIADEPTTALDAAVQAQVLDLLESLRTP-DKAMLVVSHDFAVVSRLADRVAVMWHGE 237 Query: 242 KVEENDVQPLFAAPAHPYTQSLLAAVPRLGSMRGTDKPLRFGLAPQAEARPELIASELQA 301 VE+ + + P HPYT+SLL+AV + RG P+R +A + + SEL Sbjct: 238 IVEQGPLDAILHDPQHPYTKSLLSAVSSV-QKRG---PVRQKIAVTEDGHLATLPSELPP 293 Query: 302 QAEIAAQRQPILKVRDLTTRFDVKSGIFGRVKQRVHAVEKVSFDLYSGETLAIVGESGCG 361 + +++V +LT F FG R AV +VSF L GET+ IVGESG G Sbjct: 294 G--VINNNPIVVEVNNLTKVF------FGPDGSRRVAVSEVSFALRKGETVGIVGESGSG 345 Query: 362 KSTTGRSLLRLVDIAGGRVEFGGRDLAQLPRSELRQLRRDIQFIFQDPFASLDPRMTVGY 421 K+T R +L L G V + + L ++ R R+ IQ +FQDP AS DPR TV Sbjct: 346 KTTLTRMVLGLETPNVGNVRLRDQVWSDLSDAQQRAERKRIQVVFQDPLASFDPRYTVER 405 Query: 422 SIMEPMLVHGMKEGAQERVDA--LLTRVGLTPEHGQRYPHEFSGGQRQRICIARALALNP 479 + E + V G + + R A LL V L + QR P E SGGQRQRI IARALA P Sbjct: 406 VLFEALGVAGYTDTEKTRARAIELLHLVRLDQSYLQRRPIELSGGQRQRIAIARALAPEP 465 Query: 480 KIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQI 539 +++I DE VSALDVS+QAQI++L++DL+ LG+S +FISHD+ V+ R+S R+ VM G + Sbjct: 466 EVLICDEPVSALDVSVQAQILDLLIDLKDRLGLSCLFISHDLGVIYRVSDRILVMKDGIV 525 Query: 540 VEIGPRRAIFENPQHPYTRKLMAAVP 565 VE G R +FENPQH YT+ L++A+P Sbjct: 526 VESGGVREVFENPQHIYTQTLLSAIP 551 Score = 168 bits (426), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 96/246 (39%), Positives = 150/246 (60%), Gaps = 13/246 (5%) Query: 26 AVRDLSFHVDQGETLAIVGESGSGKSVSSLAIMRLIEHGGGKIASGSLQFRRRSGQTLDL 85 AV ++SF + +GET+ IVGESGSGK+ + ++ L G + R R DL Sbjct: 322 AVSEVSFALRKGETVGIVGESGSGKTTLTRMVLGLETPNVGNV-------RLRDQVWSDL 374 Query: 86 AQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIAESIRLHQGMSRAAAQAEALRML 145 + A R I ++FQ+P+ S +P +TV + E++ + +A A+ +L Sbjct: 375 SDAQQRAERK----RIQVVFQDPLASFDPRYTVERVLFEALGVAGYTDTEKTRARAIELL 430 Query: 146 EMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPSLLIADEPTTALDVTIQAQILQL 205 +VR+ ++ L R P +LSGG RQR+ IA AL+ +P +LI DEP +ALDV++QAQIL L Sbjct: 431 HLVRLDQS--YLQRRPIELSGGQRQRIAIARALAPEPEVLICDEPVSALDVSVQAQILDL 488 Query: 206 IRSLQEEMQMGVIFITHDMGVVAEVADRVVVMCRGEKVEENDVQPLFAAPAHPYTQSLLA 265 + L++ + + +FI+HD+GV+ V+DR++VM G VE V+ +F P H YTQ+LL+ Sbjct: 489 LIDLKDRLGLSCLFISHDLGVIYRVSDRILVMKDGIVVESGGVREVFENPQHIYTQTLLS 548 Query: 266 AVPRLG 271 A+P+LG Sbjct: 549 AIPQLG 554 >gi|152981172|ref|YP_001353094.1| ABC-type oligopeptide transport system, ATPase component [Janthinobacterium sp. Marseille] Length = 353 Score = 276 bits (706), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 142/281 (50%), Positives = 191/281 (67%), Gaps = 3/281 (1%) Query: 310 QPILKVRDLTTRFDVKSGIFGRVKQRVHAVEKVSFDLYSGETLAIVGESGCGKSTTGRSL 369 QP+L ++DL F V+ +F R ++ VHAV+ VSF + G+TL IVGESGCGKSTT R + Sbjct: 18 QPLLMIKDLKKYFPVRGELFQRERKFVHAVDGVSFSVAKGKTLGIVGESGCGKSTTARLI 77 Query: 370 LRLVDIAGGRVEFGGRDLAQLPRSELRQLRRDIQFIFQDPFASLDPRMTVGYSIMEPMLV 429 RLV G + F G +A+ E ++ RR++Q +FQD FASL+PR+T+ ++ Sbjct: 78 ARLVTPDSGSMIFDGEGVAEFGGIEFKEFRRNLQMVFQDSFASLNPRLTISETVAYGPQA 137 Query: 430 HGM-KEGAQERVDALLTRVGLTPEH-GQRYPHEFSGGQRQRICIARALALNPKIVIADES 487 HG+ K A ER ALL RVGL PE RYPHE SGGQRQR+ IARALA P++VI DE+ Sbjct: 138 HGVSKAQATERAHALLARVGLQPEQFASRYPHELSGGQRQRVNIARALAFEPRLVILDEA 197 Query: 488 VSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQIVEIGPRRA 547 V+ALD S+QAQ++NL+ +L+AE ++++FISHD+ VV IS V VMY+GQ+VE+GP Sbjct: 198 VAALDKSVQAQVLNLLQELKAEHDLTYLFISHDLHVVHYISDEVMVMYMGQVVEMGPVED 257 Query: 548 IFENPQHPYTRKLMAAVPVADPTLRQPGKKLLTDEIPSPIR 588 I+ N +HPYTR L++AVP DP R L D P+PI Sbjct: 258 IYGNSRHPYTRALLSAVPSMDPANRTQHTPLSGDP-PNPIN 297 Score = 162 bits (409), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 99/254 (38%), Positives = 149/254 (58%), Gaps = 13/254 (5%) Query: 17 FATSERTVDAVRDLSFHVDQGETLAIVGESGSGKSVSSLAIMRLIEHGGGKIASGSLQFR 76 F + V AV +SF V +G+TL IVGESG GKS ++ I RL+ SGS+ F Sbjct: 37 FQRERKFVHAVDGVSFSVAKGKTLGIVGESGCGKSTTARLIARLV-----TPDSGSMIFD 91 Query: 77 RRSGQTLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIAESIRLHQGMSRAA 136 +A+ + R + M+FQ+ SLNP T+ E +A + H G+S+A Sbjct: 92 GEG-----VAEFGGIEFKEFR-RNLQMVFQDSFASLNPRLTISETVAYGPQAH-GVSKAQ 144 Query: 137 AQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPSLLIADEPTTALDV 196 A A +L V + + ++ R+PH+LSGG RQRV IA AL+ +P L+I DE ALD Sbjct: 145 ATERAHALLARVGL-QPEQFASRYPHELSGGQRQRVNIARALAFEPRLVILDEAVAALDK 203 Query: 197 TIQAQILQLIRSLQEEMQMGVIFITHDMGVVAEVADRVVVMCRGEKVEENDVQPLFAAPA 256 ++QAQ+L L++ L+ E + +FI+HD+ VV ++D V+VM G+ VE V+ ++ Sbjct: 204 SVQAQVLNLLQELKAEHDLTYLFISHDLHVVHYISDEVMVMYMGQVVEMGPVEDIYGNSR 263 Query: 257 HPYTQSLLAAVPRL 270 HPYT++LL+AVP + Sbjct: 264 HPYTRALLSAVPSM 277 >gi|152982636|ref|YP_001355208.1| ABC-type transport system, ATPase component [Janthinobacterium sp. Marseille] Length = 333 Score = 254 bits (649), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 144/327 (44%), Positives = 211/327 (64%), Gaps = 27/327 (8%) Query: 310 QPILKVRDLTTRF----DVKS---GIFG--RVKQRVHAVEKVSFDLYSGETLAIVGESGC 360 Q +L++RD++ RF D + IFG R ++ VHAV+ + ++SGE + +VGESGC Sbjct: 4 QALLELRDVSKRFAKPLDTAARIAKIFGAQRHEEVVHAVDHANLAIHSGEVVGLVGESGC 63 Query: 361 GKSTTGRSLLRLVDIAGGRVEFGGRDLAQLPRSELRQLRRDIQFIFQDPFASLDPRMTVG 420 GKST GR + L ++ G + G D+AQL ++ R+ + +Q IFQDP+ASL+PRM + Sbjct: 64 GKSTLGRIAVGLHTLSAGTRWWKGADMAQLTTADRRRTQLAMQMIFQDPYASLNPRMRIQ 123 Query: 421 YSIMEPMLVHGMKEGAQER--VDALLTRVGLTPEHGQRYPHEFSGGQRQRICIARALALN 478 + E L HGM + A+++ V ALL +VGL P +R+PH+FSGGQR RI IARALA+ Sbjct: 124 DIVGEAPLAHGMVKAAEQKDYVAALLQKVGLDPALVRRFPHQFSGGQRARIGIARALAVR 183 Query: 479 PKIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQ 538 P++++ DE+V+ALDVSIQAQ++NL ++L+ EL ++++FISHD+ VV +S RV +MYLG+ Sbjct: 184 PELLVCDEAVAALDVSIQAQVLNLFIELRNELNLTYLFISHDLGVVRHVSDRVVIMYLGR 243 Query: 539 IVEIGPRRAIFENPQHPYTRKLMAAVPVADPTLRQPGKKLLTDEIPSPI----------R 588 IVE P +F P HPYT L+A+ P + +R+ + EIPSP+ R Sbjct: 244 IVESSPTIELFAQPNHPYTSALLASAPKLE--VRKIDFVAVKGEIPSPLHPPSGCHFHPR 301 Query: 589 LVGDEPKV---EP-LKEVAPGHFVAQH 611 P+ +P LKE+AP HF A H Sbjct: 302 CPHAMPRCSVEQPLLKEIAPQHFSACH 328 Score = 164 bits (415), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 104/253 (41%), Positives = 145/253 (57%), Gaps = 19/253 (7%) Query: 21 ERTVDAVRDLSFHVDQGETLAIVGESGSGKSVSSLAIMRLIEHGGGKIASG--SLQFRRR 78 E V AV + + GE + +VGESG GKS G+IA G +L R Sbjct: 36 EEVVHAVDHANLAIHSGEVVGLVGESGCGKSTL------------GRIAVGLHTLSAGTR 83 Query: 79 SGQTLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIAESIRLHQGMSRAAAQ 138 + D+AQ A R + A + MIFQ+P SLNP + + + E+ H GM +AA Q Sbjct: 84 WWKGADMAQLTTADRRRTQLA-MQMIFQDPYASLNPRMRIQDIVGEAPLAH-GMVKAAEQ 141 Query: 139 AEALR-MLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPSLLIADEPTTALDVT 197 + + +L+ V + A ++ R PHQ SGG R R+ IA AL+ +P LL+ DE ALDV+ Sbjct: 142 KDYVAALLQKVGLDPA--LVRRFPHQFSGGQRARIGIARALAVRPELLVCDEAVAALDVS 199 Query: 198 IQAQILQLIRSLQEEMQMGVIFITHDMGVVAEVADRVVVMCRGEKVEENDVQPLFAAPAH 257 IQAQ+L L L+ E+ + +FI+HD+GVV V+DRVV+M G VE + LFA P H Sbjct: 200 IQAQVLNLFIELRNELNLTYLFISHDLGVVRHVSDRVVIMYLGRIVESSPTIELFAQPNH 259 Query: 258 PYTQSLLAAVPRL 270 PYT +LLA+ P+L Sbjct: 260 PYTSALLASAPKL 272 >gi|152982798|ref|YP_001353095.1| ABC-type oligopeptide transport system, ATPase component [Janthinobacterium sp. Marseille] Length = 332 Score = 231 bits (590), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 123/264 (46%), Positives = 171/264 (64%), Gaps = 7/264 (2%) Query: 4 SQRVLDVSHLNVRFATSERTVDAVRDLSFHVDQGETLAIVGESGSGKSVSSLAIMRLIEH 63 S+ ++ V L V F + R A+ +SF + GE L ++GESGSGKSV+ ++RL Sbjct: 2 SKPLVSVRDLTVAFVGNRR-AHALDKISFDLQAGEVLGLLGESGSGKSVTLRTLLRLHPQ 60 Query: 64 GGGKIASGSLQFRRRSGQTLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIA 123 +I SGS++ +D+ + + RG +M+FQEP + +PV+T+G+QI Sbjct: 61 RTTRI-SGSMEV-----DGMDVLALKGCELEAYRGGTASMVFQEPGLAFDPVYTIGQQIT 114 Query: 124 ESIRLHQGMSRAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPS 183 E+IR H+ + +A AL+MLE V+IP+A+R +PH+LSGGMRQR MIA+AL+CKP Sbjct: 115 EAIRAHEALDHRSAMQRALQMLERVQIPQARRRYDAYPHELSGGMRQRAMIALALACKPR 174 Query: 184 LLIADEPTTALDVTIQAQILQLIRSLQEEMQMGVIFITHDMGVVAEVADRVVVMCRGEKV 243 LL+ADEPTTALD T+Q QIL L+R LQ+E M VIF+THD+G EVAD++ VM G V Sbjct: 175 LLLADEPTTALDATVQIQILLLLRELQKETGMSVIFVTHDIGAAVEVADKIAVMYGGRIV 234 Query: 244 EENDVQPLFAAPAHPYTQSLLAAV 267 EEN V + P HPYT LLA+ Sbjct: 235 EENSVAGIVHNPRHPYTAGLLAST 258 Score = 182 bits (462), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 113/280 (40%), Positives = 160/280 (57%), Gaps = 23/280 (8%) Query: 310 QPILKVRDLTTRFDVKSGIFGRVKQRVHAVEKVSFDLYSGETLAIVGESGCGKSTTGRSL 369 +P++ VRDLT F G +R HA++K+SFDL +GE L ++GESG GKS T R+L Sbjct: 3 KPLVSVRDLTVAF------VG--NRRAHALDKISFDLQAGEVLGLLGESGSGKSVTLRTL 54 Query: 370 LRL----VDIAGGRVEFGGRDLAQLPRSELRQLRRDI-QFIFQDPFASLDPRMTVGYSIM 424 LRL G +E G D+ L EL R +FQ+P + DP T+G I Sbjct: 55 LRLHPQRTTRISGSMEVDGMDVLALKGCELEAYRGGTASMVFQEPGLAFDPVYTIGQQIT 114 Query: 425 EPMLVHGMKE--GAQERVDALLTRVGLTPEHGQRY---PHEFSGGQRQRICIARALALNP 479 E + H + A +R +L RV + P+ +RY PHE SGG RQR IA ALA P Sbjct: 115 EAIRAHEALDHRSAMQRALQMLERVQI-PQARRRYDAYPHELSGGMRQRAMIALALACKP 173 Query: 480 KIVIADESVSALDVSIQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQI 539 ++++ADE +ALD ++Q QI+ L+ +LQ E G+S IF++HD+ ++ ++AVMY G+I Sbjct: 174 RLLLADEPTTALDATVQIQILLLLRELQKETGMSVIFVTHDIGAAVEVADKIAVMYGGRI 233 Query: 540 VEIGPRRAIFENPQHPYTRKLMAAVPVAD----PTLRQPG 575 VE I NP+HPYT L+A+ + P L PG Sbjct: 234 VEENSVAGIVHNPRHPYTAGLLASTVSTENRGKPLLAVPG 273 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.321 0.136 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,318,814 Number of extensions: 52709 Number of successful extensions: 465 Number of sequences better than 1.0e-08: 60 Number of HSP's gapped: 364 Number of HSP's successfully gapped: 112 Length of query: 617 Length of database: 1,221,021 Length adjustment: 89 Effective length of query: 528 Effective length of database: 891,988 Effective search space: 470969664 Effective search space used: 470969664 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)