BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1678.p
         (151 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981791|ref|YP_001355302.1| 16 kDa heat shock protein A [Ja...   223   4e-60

>gi|152981791|ref|YP_001355302.1| 16 kDa heat shock protein A
           [Janthinobacterium sp. Marseille]
          Length = 150

 Score =  223 bits (568), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 111/151 (73%), Positives = 128/151 (84%), Gaps = 2/151 (1%)

Query: 1   MRTFDLSPLYRTAIGFDRLAQMFDNAQRTD-QPSYPPYNIELVAEDKYRITMAVAGFARS 59
           MRT+D SPLYR+AIGFDRLAQ+FD+AQR + QPSYPPYNIEL  E+KYRITMAVAGF RS
Sbjct: 1   MRTYDFSPLYRSAIGFDRLAQLFDDAQRGEAQPSYPPYNIELTGENKYRITMAVAGFDRS 60

Query: 60  EIDIETENETLKITGRKQKEDKQVNFLHRGIAARDFEQRFQLANHIKVVGANLENGLLNI 119
           EI+IE+E +TLKITGRK +++   NFLHRGIAAR+FE  FQLA+H+ VVGA L+NGLLNI
Sbjct: 61  EIEIESERDTLKITGRKARDESTRNFLHRGIAARNFEHSFQLADHVHVVGAKLDNGLLNI 120

Query: 120 ELVREIPEALKPRKIEIGAGDDSNVQRLERA 150
           EL REIPEALKPRKI I A  D NVQ L+ A
Sbjct: 121 ELAREIPEALKPRKIAIDAVAD-NVQTLKAA 150


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.136    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 327,871
Number of extensions: 11904
Number of successful extensions: 31
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 30
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 1,221,021
Length adjustment: 75
Effective length of query: 76
Effective length of database: 943,746
Effective search space: 71724696
Effective search space used: 71724696
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)