BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1565.p
         (452 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980989|ref|YP_001355123.1| hemolysin [Janthinobacterium sp...   233   2e-62
gi|152980041|ref|YP_001352118.1| Mg2+ and Co2+ transporter [Jant...    79   8e-16

>gi|152980989|ref|YP_001355123.1| hemolysin [Janthinobacterium sp.
           Marseille]
          Length = 443

 Score =  233 bits (594), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 230/431 (53%), Gaps = 12/431 (2%)

Query: 10  LLLILLLVVVSAFLSCAEISIAASRKIRLEMMSKEGEANADRVLSLQAQPGNFFTVVQIG 69
           + +IL L++V+   + +EI+I  S++IRL+ +S+ G   A   L L   P  F + +Q+G
Sbjct: 3   IFIILGLILVNGVFAMSEIAIVTSKRIRLQKLSENGSRGAQAALDLSDSPSRFLSTIQVG 62

Query: 70  LNAVAILGGVVGEPALTPHMREIISTFYTGPLLE--NASFAMSFLVVTAFF--ILFADLM 125
           +  + I  G  GE +L   +   ++     P+L       A+  +VV   F  ++  +L+
Sbjct: 63  ITLIGIFNGAFGEASLVERLTPEVALI---PVLNVYAREIALGVVVVGITFASLILGELV 119

Query: 126 PKRLAMAAPERAAVVLVKPMLLLETLFKPLVWFFNSLSKWIFTLFGLPQVRQDVITPSEI 185
           PKR+AM  PE  A V+  PML L  L  P V      +++I  + G+   + D +T  EI
Sbjct: 120 PKRIAMQYPEVVASVVAAPMLWLSRLMGPFVKVLTGTTEFILRVLGMHHKKDDAVTEEEI 179

Query: 186 HAMVDAGAQAGVLLTQEHHLIENVFELESRYVPSAMTPRDSIVYFLLTDSEETIRLKIID 245
             +   G  AG+    EH ++     L+ + V   MTPR  + +  L D  E    KI D
Sbjct: 180 AGLFREGTDAGLFEKTEHDIVSRALRLDDQRVAGLMTPRLDVHFIDLEDPIEVNLAKIAD 239

Query: 246 HPHSRFLVCDGHIDAVLGYIDSKDVLKRLLKGEQFSLAD-KGLVHPPLSIPDSLNLWEVL 304
             ++RF VC G I  V+G + +  + ++ ++G+  +  D      PPL +P++++  ++L
Sbjct: 240 SSYNRFPVCKGDISHVIGIVHAGSLFEQAIRGKAINTVDIAAATRPPLFVPETISAMQLL 299

Query: 305 ERMKAMDEDLAIVVNEYALVVGIISITDVTGVLMGNLLAITE-EEQQIVKRDANSWLMDG 363
           E +K    +LA+V++EY  + GI++++DV G L+G++  I E  E   V+RD  SWL+DG
Sbjct: 300 ETLKKNRAELALVIDEYGEIEGIVTLSDVLGALVGDVSVIDEHHEVDGVRRDDGSWLIDG 359

Query: 364 LTPLNDVMSELEIE-EYPNPVG--YETLSGFIMYMLRKIPKKTDFVLFSDFKFEVVDIEG 420
               +     LE +  +P      Y TL+GF+M  L  IP+ +D   +  ++ EVVD++ 
Sbjct: 360 GVSFDRFRELLETDVRFPEEASGTYHTLAGFVMTFLGHIPQMSDSFEWEGYRIEVVDMDR 419

Query: 421 NRINQLLVTRF 431
           NRI++LL+T+ 
Sbjct: 420 NRIDRLLITKL 430


>gi|152980041|ref|YP_001352118.1| Mg2+ and Co2+ transporter
           [Janthinobacterium sp. Marseille]
          Length = 296

 Score = 78.6 bits (192), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 27/295 (9%)

Query: 153 KPLVWFFNSLSKWIFTLFGLPQVRQDVIT---PSEIHAMVDAGAQAGVLLTQEHHLIENV 209
           KP    F  L+  I      P+ R +++T    +    ++DA A A         +IE V
Sbjct: 14  KPHRSIFERLTALIAPE---PESRSELLTILHDAHERNLIDADALA---------MIEGV 61

Query: 210 FELESRYVPSAMTPRDSIVYFLLTDSEETIRLKIIDHPHSRFLVCDGHIDAVLGYIDSKD 269
           F++        M PR  +    +T   E     ++   HSRF   DG  D V+G + +KD
Sbjct: 62  FQVSELSARDIMVPRAQMDVVDITKPIEEWLPMVLSTAHSRFPAVDGERDKVVGILMAKD 121

Query: 270 VLKRLLKGEQFSLADKGLVHPPLSIPDSLNLWEVLERMKAMDEDLAIVVNEYALVVGIIS 329
           +L R    E F +  + ++   + IP+S  L  +L   +A    +AIVV+EY  V G+I+
Sbjct: 122 LL-RYYAEESFDI--RRMLRTAVFIPESKRLNVLLGDFRAKHNHMAIVVDEYGGVAGLIT 178

Query: 330 ITDVTGVLMGNL---LAITEEEQQIVKRDANS----WLMDGLTPLNDVMSELEIEEYPNP 382
           I DV   ++G++        +E  I+   A      W +  LT +     EL +  + NP
Sbjct: 179 IEDVLEQIVGDIEDEYDFDNDEDNILSIKAGEHGPRWRVKALTEIAQFNEELGVSLF-NP 237

Query: 383 VGYETLSGFIMYMLRKIPKKTDFVLFSDFKFEVVDIEGNRINQLLVTRFKQDKSE 437
              +T+ G+I   L ++P K + +   D +FE++  +   I+ +LV +     SE
Sbjct: 238 -DVDTIGGYIADHLGRMPHKGEVLDIDDLRFEILRADARHIHVVLVEKLPPAVSE 291


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.322    0.137    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 928,089
Number of extensions: 38277
Number of successful extensions: 104
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 98
Number of HSP's successfully gapped: 2
Length of query: 452
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 366
Effective length of database: 903,079
Effective search space: 330526914
Effective search space used: 330526914
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 131 (55.1 bits)