BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1531.p (299 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980950|ref|YP_001352503.1| sulfate ABC transporter, permea... 471 e-134 gi|152981039|ref|YP_001354282.1| sulfate transport system permea... 241 6e-65 gi|152980049|ref|YP_001352502.1| sulfate transport system permea... 151 4e-38 gi|152980225|ref|YP_001354281.1| sulfate transport system permea... 146 1e-36 gi|152981300|ref|YP_001355347.1| molybdate transport system perm... 76 3e-15 >gi|152980950|ref|YP_001352503.1| sulfate ABC transporter, permease protein [Janthinobacterium sp. Marseille] Length = 302 Score = 471 bits (1211), Expect = e-134, Method: Compositional matrix adjust. Identities = 239/297 (80%), Positives = 260/297 (87%), Gaps = 7/297 (2%) Query: 2 SAAPISAARQTIARGEPPLTPAATTEPWWVRALLIGIALVFLTLFLFVPLVSVFYEALRK 61 SA P+S AR P PAAT EP W+R LLI +AL FLTLFLFVPL SVF EAL+K Sbjct: 10 SAIPVSLARA-------PCVPAATLEPTWIRTLLIVVALAFLTLFLFVPLASVFAEALKK 62 Query: 62 GWDVYVASITEDDAWSAIKLTILTAAIAVPLNLVFGVAAAWAIAKFEFRGKNILLTLIDL 121 GWD Y+A+I E+DA SAIKLT+LTAAIAVPLNLVFGVAA+W IAKF+FRGK+ILLTLIDL Sbjct: 63 GWDAYIAAILEEDAVSAIKLTLLTAAIAVPLNLVFGVAASWCIAKFDFRGKSILLTLIDL 122 Query: 122 PFSVSPVISGLIYVLLFGLQGYLGPWLREHDIKILFAVPGIVLATIFVTFPFVARELIPL 181 PFSVSPVISGLIYVLLFG QG+ G WL+EH+IKILFAVPGIVLATIFVTFPFVARELIPL Sbjct: 123 PFSVSPVISGLIYVLLFGAQGWFGGWLQEHNIKILFAVPGIVLATIFVTFPFVARELIPL 182 Query: 182 MQSQGSEEEEAALVLGASGWRTFWHVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHI 241 MQSQGSEEEEAALVLGASGW+TFWHVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHI Sbjct: 183 MQSQGSEEEEAALVLGASGWKTFWHVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHI 242 Query: 242 RGETNTIPLQVEILYNEFNITGAFAVASLLAFLALVTLAIKSVIEWRLHQQHSASEQ 298 RG+TNTIPLQVEILYNE+ + AFAVASLLA LALVTLA+KS IEWRL H ++ Sbjct: 243 RGQTNTIPLQVEILYNEYQFSAAFAVASLLAMLALVTLALKSFIEWRLRDTHEQFQE 299 >gi|152981039|ref|YP_001354282.1| sulfate transport system permease protein [Janthinobacterium sp. Marseille] Length = 283 Score = 241 bits (614), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 128/266 (48%), Positives = 195/266 (73%) Query: 34 LLIGIALVFLTLFLFVPLVSVFYEALRKGWDVYVASITEDDAWSAIKLTILTAAIAVPLN 93 +LIG+ ++ L L +PLV +F +A G ++ A++ ED A+ LT+ A + VP+N Sbjct: 15 ILIGLGIIMTILLLVLPLVLIFTQAFSGGLELLWANLNEDFMKHALGLTLTAAVLTVPIN 74 Query: 94 LVFGVAAAWAIAKFEFRGKNILLTLIDLPFSVSPVISGLIYVLLFGLQGYLGPWLREHDI 153 LVFG+ AW + ++F G+ +L+TL+++P++ SPV++G Y++++GL+G +G WL +D+ Sbjct: 75 LVFGILLAWCVTHYDFFGRRLLVTLVEIPYATSPVVAGFCYLVVYGLEGTIGKWLYANDV 134 Query: 154 KILFAVPGIVLATIFVTFPFVARELIPLMQSQGSEEEEAALVLGASGWRTFWHVTLPNIK 213 +++FA PGI++ T+FVT P++AR L+PLMQ QG+EEE AAL LGASGW+ FW VTLPNIK Sbjct: 135 QLMFAWPGIIMVTVFVTAPYIARILMPLMQKQGTEEEIAALSLGASGWQIFWRVTLPNIK 194 Query: 214 WGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTIPLQVEILYNEFNITGAFAVASLLAF 273 W LLYG ++ NARA+GEFGAV+VVSG I +T T+PL VE L N++ AF A+LLA Sbjct: 195 WALLYGAVITNARAVGEFGAVAVVSGTIMNQTLTLPLLVEQLNNDYKTAAAFTAAALLAC 254 Query: 274 LALVTLAIKSVIEWRLHQQHSASEQV 299 +AL+TL +K+++EWR ++ + +V Sbjct: 255 MALLTLVLKTLMEWRQERREAEPAEV 280 >gi|152980049|ref|YP_001352502.1| sulfate transport system permease protein [Janthinobacterium sp. Marseille] Length = 287 Score = 151 bits (382), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 83/249 (33%), Positives = 142/249 (57%), Gaps = 3/249 (1%) Query: 34 LLIGIALVFLTLFLFVPLVSVFYEALRKGWDVYVASITEDDAWSAIKLTILTAAIAVPLN 93 L +G + +L+L + +PL +VF + WD +VA++T D ++ KL+ + I LN Sbjct: 23 LSLGFTIFYLSLIVLIPLSAVFLKTFTMSWDAFVAAVTSDRVIASYKLSFGASLIGAVLN 82 Query: 94 LVFGVAAAWAIAKFEFRGKNILLTLIDLPFSVSPVISGLIYVLLFGLQGYLGPWLREHDI 153 FG AW + +++F GK I+ ++DLPF++ ++G+ L+ G++G +L I Sbjct: 83 AFFGGIVAWVLVRYKFPGKKIIDAMVDLPFALPTAVAGIALTALYSPNGWIGRYLEAIGI 142 Query: 154 KILFAVPGIVLATIFVTFPFVARELIPLMQSQGSEEEEAALVLGASGWRTFWHVTLPNIK 213 K+ F G+++A F+ PFV R + P+++ E EEAA LGAS W+TF V P + Sbjct: 143 KVAFTPLGVIIALTFIGLPFVVRTVQPVLEDMEKELEEAAASLGASHWQTFTKVIFPTVF 202 Query: 214 WGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTIPLQVEILYNEFNITGAFAVASLL-- 271 LL G L ARA GE+G+V ++G++ + PL + +++ GA A+A ++ Sbjct: 203 PALLTGFALAFARATGEYGSVIFIAGNMPMVSEITPLFIVTKLEQYDYAGATAIAVVMLL 262 Query: 272 -AFLALVTL 279 +FL L+T+ Sbjct: 263 ASFLMLLTI 271 >gi|152980225|ref|YP_001354281.1| sulfate transport system permease protein [Janthinobacterium sp. Marseille] Length = 260 Score = 146 bits (369), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 83/256 (32%), Positives = 145/256 (56%) Query: 37 GIALVFLTLFLFVPLVSVFYEALRKGWDVYVASITEDDAWSAIKLTILTAAIAVPLNLVF 96 G + ++++L + +P+ ++ WD Y +IT+ + K+TI A + + Sbjct: 4 GFSTLYISLVILLPISALLLYVSGMSWDQYWFAITDARVLQSYKITIQGAFYSTIIVTFI 63 Query: 97 GVAAAWAIAKFEFRGKNILLTLIDLPFSVSPVISGLIYVLLFGLQGYLGPWLREHDIKIL 156 G AW I +++F G+ ++ +L+DLPF++ ++G+ LF G+LG W IKI Sbjct: 64 GFLLAWIITRYDFPGRRLIDSLVDLPFALPTSVAGITLSALFIPTGWLGQWFEIFGIKIS 123 Query: 157 FAVPGIVLATIFVTFPFVARELIPLMQSQGSEEEEAALVLGASGWRTFWHVTLPNIKWGL 216 +A PGIV+A F + PF+ R + P+++ E EEAAL+LGA+ W+ FW V LP + L Sbjct: 124 YAFPGIVVAMTFTSLPFIVRSVQPVLEDMEKELEEAALMLGANKWQIFWRVILPTLIPAL 183 Query: 217 LYGVILCNARAMGEFGAVSVVSGHIRGETNTIPLQVEILYNEFNITGAFAVASLLAFLAL 276 + G R++GEFGAV +++G+I ET L + + E+N A A+AS++ +L Sbjct: 184 ITGSSQAFIRSLGEFGAVIMIAGNIPFETEVTSLMLFVRLQEYNYPAAAAIASVVLLASL 243 Query: 277 VTLAIKSVIEWRLHQQ 292 + L + V++ R ++ Sbjct: 244 ILLFLLQVVQGRFFKK 259 >gi|152981300|ref|YP_001355347.1| molybdate transport system permease protein [Janthinobacterium sp. Marseille] Length = 224 Score = 75.9 bits (185), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 1/181 (0%) Query: 73 DDAWSAIKLTILTAAIAVPLNLVFGVAAAWAIAKFEFRGKNILLTLIDLPFSVSPVISGL 132 D AI LT+ A++ + L+ G AW +A+ K+ + + LP + P + G Sbjct: 4 DPNIGAIVLTLKLASLTTIILLLIGTPLAWWLARTRSWLKSPVGAFVALPIVLPPTVIGF 63 Query: 133 IYVLLFGLQGYLGPWLREHDIKIL-FAVPGIVLATIFVTFPFVARELIPLMQSQGSEEEE 191 ++ G G +G + L F+ G+V+ ++F + PFV + + ++ G E Sbjct: 64 YLLVALGPNGPVGQLTQAMGFGTLPFSFTGLVVGSVFYSMPFVVQPIQNAFEAMGERPLE 123 Query: 192 AALVLGASGWRTFWHVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTIPLQ 251 A L AS TF+ VTLP K G L +++ A +GEFG V ++ G+I +T I +Q Sbjct: 124 VAATLRASPLDTFFSVTLPLAKPGYLTAIVMGFAHTVGEFGVVLMIGGNIPNQTRMISVQ 183 Query: 252 V 252 + Sbjct: 184 I 184 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.326 0.139 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 572,971 Number of extensions: 21874 Number of successful extensions: 122 Number of sequences better than 1.0e-08: 9 Number of HSP's gapped: 119 Number of HSP's successfully gapped: 9 Length of query: 299 Length of database: 1,221,021 Length adjustment: 83 Effective length of query: 216 Effective length of database: 914,170 Effective search space: 197460720 Effective search space used: 197460720 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 129 (54.3 bits)