BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1501.p
         (357 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980973|ref|YP_001351728.1| alkyl hydroperoxide reductase s...    62   4e-11
gi|152980722|ref|YP_001352843.1| thioredoxin reductase (NADPH) [...    60   3e-10

>gi|152980973|ref|YP_001351728.1| alkyl hydroperoxide reductase
           subunit F [Janthinobacterium sp. Marseille]
          Length = 531

 Score = 62.4 bits (150), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 29/232 (12%)

Query: 109 FDVETSTGTKFITKTIFIAAGVGSFQPRTLKVEGIEQFEGSQVFYRVK-DPALFEGKNIV 167
            +V+   G    +KT+ ++ G    + +T+ V G  ++    V Y    D  LF+GK + 
Sbjct: 299 IEVKLKDGGSLKSKTVILSTGA---RWKTINVPGENEYRNKGVAYCPHCDGPLFKGKRVA 355

Query: 168 ICGGGDSALDWALNFVGKAESVILLHRREEFRAAPASVAKMKELCE-----QYEMQLVIG 222
           + GGG+S ++ A++  G    V L+    E RA      K+  L         +   + G
Sbjct: 356 VIGGGNSGVEAAIDLAGIVGHVTLIEFGAELRADAVLQRKLNSLANVTVITSAQTTEITG 415

Query: 223 ---QVTGTEIKDGKLAEVKVTGADGVTRRLPLDMLLVFFGLSPKLGPIAEW--GLEIERK 277
              +V G   KD K  E+K    +GV          +  GL P      EW  G     +
Sbjct: 416 DGKRVNGLVYKDRKTEEIKSVELEGV---------FIQIGLVPN----TEWLKGTVALSR 462

Query: 278 QLKVMDTEKFETNVPGIFAVGDINTYPGKKKLILSGFHEAALAAFGAAPYIF 329
             ++       T++PG+FA GD+ T P K+ +I  G  E A A+  A  Y+ 
Sbjct: 463 HGEIEVDSHGRTSIPGVFAAGDVTTVPYKQIVIAVG--EGAKASLSAFDYLI 512


>gi|152980722|ref|YP_001352843.1| thioredoxin reductase (NADPH)
           [Janthinobacterium sp. Marseille]
          Length = 317

 Score = 59.7 bits (143), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 133/322 (41%), Gaps = 24/322 (7%)

Query: 16  ADAVIIGAGPVGLFQVFELGLLEIKAHVIDSLPVVGGQCVELYPDKPIYDIPAVPV-CTG 74
           A  +I+G+GP G           +K  +I  +   GGQ   L     + + P  P+   G
Sbjct: 7   AHVLILGSGPAGYSAAVYAARANLKPVLITGVEQ-GGQ---LMTTTDVENWPGDPLGVQG 62

Query: 75  QELTDNLLKQIEPFSPTFHLGQEVTVVNKREDGRFDVETSTGTKFITKTIFIAAGVGSFQ 134
            EL   LL+  E F+         T     +  R         ++   ++ IA G  +  
Sbjct: 63  PELMQRLLQHAERFNTEIIFDHIHTTKLDEKPIRL---IGDAGEYTCDSLIIATGASA-- 117

Query: 135 PRTLKVEGIEQFEGSQVFYRVK-DPALFEGKNIVICGGGDSALDWALNFVGKAESVILLH 193
            + L +   + F G  V      D   +  + + + GGG++A++ AL     A  V ++H
Sbjct: 118 -QYLGLPSEQAFMGKGVSACATCDGFFYRNQEVAVIGGGNTAVEEALYLSNIANKVTVVH 176

Query: 194 RREEFRAAPASV----AKMKELCEQYEMQLVIGQVTGTEIKDGKLAEVKVTGADGVTRRL 249
           RR++FRA    +    AK+ E   + +    + +VTG +   G       + ADG    +
Sbjct: 177 RRDKFRAEAILIDRLMAKVAEGKIEVKWNSTLEEVTGDD--SGVTGMTIKSTADGSITPI 234

Query: 250 PLDMLLVFFGLSPKLGPIAEWGLEIERKQLKV---MDTEKFETNVPGIFAVGDINTYPGK 306
            L  + V  G  P    I E  LE+    +K    ++     T+VPG+FA GD+  +  +
Sbjct: 235 KLHGVFVAIGHKPNT-SIFEGQLEMNNGYIKTKTGLEGMATSTSVPGVFAAGDVQDHVYR 293

Query: 307 KKLILSGFHEAALAAFGAAPYI 328
           + +  +G     +AA  A  Y+
Sbjct: 294 QAITSAG--TGCMAALDAQRYL 313


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.139    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 805,892
Number of extensions: 32676
Number of successful extensions: 116
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 116
Number of HSP's successfully gapped: 2
Length of query: 357
Length of database: 1,221,021
Length adjustment: 84
Effective length of query: 273
Effective length of database: 910,473
Effective search space: 248559129
Effective search space used: 248559129
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)