BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1364.p (613 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152980644|ref|YP_001354920.1| para-aminobenzoate synthetase c... 662 0.0 gi|152980327|ref|YP_001351925.1| anthranilate synthase component... 142 8e-35 >gi|152980644|ref|YP_001354920.1| para-aminobenzoate synthetase component I [Janthinobacterium sp. Marseille] Length = 615 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/613 (58%), Positives = 426/613 (69%), Gaps = 14/613 (2%) Query: 2 TDCFALLDDHLASPADPRSRLYSGHLRTLACHQAEDFPALLAEMQTALAAGQHAVALWSY 61 + CFALLDD AS AD RSRLY+GH+ L C QA PALL EMQ AL G+ AV L++Y Sbjct: 11 SSCFALLDDIDASAADARSRLYTGHIGVLTCRQAAQLPALLREMQQALQQGKFAVGLFAY 70 Query: 62 ELGAALQGLPHRPLAEPLARVLLFSRCQRLTAAEVDDWLAAQAEGDSADIVHLRSSVDQA 121 ELGA + + + LA +LLF RC+ L+AA+V WL QA +A I + + D+ Sbjct: 71 ELGADMHAIDAHANGQALAEILLFERCEHLSAAQVQAWLQEQASSAAAGIAQVSADTDET 130 Query: 122 SFSAAIDRIRDYIAAGHTYQVNYTYRLHFDVHGDAISLYRRLRARQPVPYGALLRDEQGG 181 F AAI RI+ YIAAG TYQVNYTYRL FD +G +LYRRLR RQPVPYGALL G Sbjct: 131 GFCAAIARIQAYIAAGDTYQVNYTYRLRFDAYGSVHALYRRLRERQPVPYGALLALPDGR 190 Query: 182 MVLSCSPELFVTHQDGLLQAKPMKGTARALPDGAADAETLNAQRAQALAADDKNRAENLM 241 VLS SPELFV H DG+L +PMKGTA A D D A ALAAD KNRAENLM Sbjct: 191 AVLSLSPELFVRHDDGVLTVRPMKGTAAASGDAQQDQGA-----ADALAADTKNRAENLM 245 Query: 242 IVDLLRNDLGRVALPGSVQVPQLFEVSRYGQVLQMTSTIHARLRPEATLVDTLAALYPCG 301 IVDLLRNDLGRVA GSV+V +LF+V RY VLQMTST+HA+L A L + ALYPCG Sbjct: 246 IVDLLRNDLGRVAKTGSVKVDKLFDVQRYSSVLQMTSTVHAQLHESAGLPEIFDALYPCG 305 Query: 302 SITGAPKRRTMEIIDELETEARGLYTGAIGWFDAPRAGSHAIGDFCLSVPIRTLQLQP-P 360 SITGAPK RTM+II ELE RGLYTGAIG+FD P A + A+G+FCLSVPIRTLQLQ Sbjct: 306 SITGAPKHRTMQIIRELELNPRGLYTGAIGYFDPP-AAAQALGNFCLSVPIRTLQLQAQN 364 Query: 361 QHGLRRGVMGVGAGIVHDSQAASEFAECQLKAAFLTGLEKDFSLFETLYAS--HGTCRHL 418 Q G+R+G MGVGAGIV+DS A E+ EC+LKA FL ++ +F LFET++A+ HG CRHL Sbjct: 365 QDGIRKGEMGVGAGIVYDSVALDEYDECRLKARFLIDMQAEFELFETMHATRAHG-CRHL 423 Query: 419 DLHLQRLQASAGALGFAFDEAMIRQQLADTCAGLAADFPADQAHRLRLALDAQGRITLQH 478 + HLQRL SA FAFDE IR L TCA L + +RLR AL G +Q Sbjct: 424 ERHLQRLALSAAYFNFAFDEHKIRTALNTTCAALV----DETEYRLRFALKQDGSHAIQT 479 Query: 479 APLAPLAGPVKVFLADTATDSSELFLRHKSTRRARYDAAWKEAERRGGFDLLFFNERDEL 538 A L LA PVK+ LA A D+ +LFLRHKST R YD AW+ AE++G FD LF N + ++ Sbjct: 480 AALTALAEPVKIMLATQAMDADDLFLRHKSTIRTAYDLAWRTAEQQGAFDQLFCNTQGQV 539 Query: 539 TEGGRSNVLVHIDGRWRTPPLAAGLLPGVMRQVLLADPTWDAIEAVITRADLLRAQQIVV 598 TEGGRS + V + G+W TPPL++GLLPGVMR V+L DP WDA EA++T D+ A+QI V Sbjct: 540 TEGGRSTLFVKLQGKWYTPPLSSGLLPGVMRAVVLEDPAWDAQEAILTLEDVRNAEQIYV 599 Query: 599 CNALRGALPAILV 611 CNALRG +PA++V Sbjct: 600 CNALRGMVPAVIV 612 >gi|152980327|ref|YP_001351925.1| anthranilate synthase component I [Janthinobacterium sp. Marseille] Length = 498 Score = 142 bits (357), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 97/283 (34%), Positives = 147/283 (51%), Gaps = 31/283 (10%) Query: 119 DQASFSAAIDRIRDYIAAGHTYQVNYTYRLHFDVHGDAISLYRRLRARQPVPYGALLR-- 176 D+ S+ AA+ + ++Y+ AG QV R+ ++LYR LR+ P PY Sbjct: 220 DKESYLAAVAKAKEYVMAGDLMQVQIGQRIKKQYVDSPLTLYRALRSLNPSPYMYFYNFG 279 Query: 177 DEQGGMVLSCSPELFVTHQ-----DGLLQAKPMKGTARALPDGAADAETLNAQRAQALAA 231 D Q ++ SPE+ V ++ + +P+ GT P GA + +A A+ L A Sbjct: 280 DMQ---IVGSSPEILVRNETVSEDKKKITIRPLAGTR---PRGATPEK--DAVLAKELLA 331 Query: 232 DDKNRAENLMIVDLLRNDLGRVALPGSVQVPQLFEVSRYGQVLQMTSTIHARLRPEATLV 291 D K AE++M++DL RND+GR+A GSVQV + +Y V + S + L+ + + Sbjct: 332 DPKEIAEHVMLIDLARNDIGRIAETGSVQVTDKLVIEKYSHVQHIVSNVEGTLKSGLSNL 391 Query: 292 DTLAALYPCGSITGAPKRRTMEIIDELETEARGLYTGAIGWFDAPRAGSHAIGDFCLSVP 351 D L A +P G+++GAPK R MEIIDELE RG+Y GA G+ G+ L++ Sbjct: 392 DVLKATFPAGTLSGAPKVRAMEIIDELEPTKRGIYGGACGYLSFG-------GEMDLAIA 444 Query: 352 IRTLQLQPPQHGLRRGVMGV--GAGIVHDSQAASEFAECQLKA 392 IRT ++ G++ V AGIV DS E+ E + KA Sbjct: 445 IRT-------GVIKDGMLYVQAAAGIVADSVPEMEWQETENKA 480 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.323 0.136 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 1,417,833 Number of extensions: 59479 Number of successful extensions: 190 Number of sequences better than 1.0e-08: 2 Number of HSP's gapped: 184 Number of HSP's successfully gapped: 2 Length of query: 613 Length of database: 1,221,021 Length adjustment: 89 Effective length of query: 524 Effective length of database: 891,988 Effective search space: 467401712 Effective search space used: 467401712 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 132 (55.5 bits)