BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1325.p
         (279 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981126|ref|YP_001355177.1| carboxyvinyl-carboxyphosphonate...    75   5e-15

>gi|152981126|ref|YP_001355177.1| carboxyvinyl-carboxyphosphonate
           phosphorylmutase [Janthinobacterium sp. Marseille]
          Length = 293

 Score = 75.1 bits (183), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 123/246 (50%), Gaps = 24/246 (9%)

Query: 22  FVLPNPWDVGSAKMLASMGFKCLATTSSGYA-WSTGRP-EGEVSRDQTIAHLRQMVDATE 79
            ++P  ++  SA+++A +GF+ L  T +G      G P +G +  ++   H  ++ DA +
Sbjct: 22  LLVPGAFNALSARVIADLGFEALYITGAGVTNMYFGMPDQGFIGLNELADHTARIRDAVD 81

Query: 80  LPINADFESGFGATLEEVTESVRMAIDTGVAGLSIEDSTGSAALPLR----------SIA 129
           +PI  D ++GFG  L  V  ++R     G   + +ED       P R          S A
Sbjct: 82  IPIIVDADTGFGNALN-VRHTIRTLERAGADAVQLEDQIS----PKRCGHFNGKEVISCA 136

Query: 130 ESVERIRAAKLAIAESGEDVLLIGRAENFFVGQPDLDDALRRLKAYAEAGADCLYAPGIK 189
           E V +I AA  A +++G  +L++ R +   V     +DAL R   Y+EAGAD L+    +
Sbjct: 137 EMVGKIHAAVDARSDAG--MLIMARTDARSV--HGFEDALERAARYSEAGADILFVEATE 192

Query: 190 TAEQIKAVVAAV-APKPVNVLIGWPSEL-TLQDLEHLGVRRVSLGGALARAAWGCAQRAA 247
           TA++I+ +  A+  P+ VN++IG  + + +  +L  LG   V    A  + A    Q+A 
Sbjct: 193 TADEIRRLPQALDKPQLVNLVIGGKTPIFSANELAGLGYGIVLYANAALQGAVAGMQKAL 252

Query: 248 RTILND 253
            T+L D
Sbjct: 253 -TVLRD 257


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.317    0.132    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 573,830
Number of extensions: 21312
Number of successful extensions: 97
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 197
Effective length of database: 917,867
Effective search space: 180819799
Effective search space used: 180819799
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 129 (54.3 bits)