BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1270.p
         (531 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980470|ref|YP_001352856.1| glutamate--cysteine ligase [Jan...   679   0.0  

>gi|152980470|ref|YP_001352856.1| glutamate--cysteine ligase
           [Janthinobacterium sp. Marseille]
          Length = 528

 Score =  679 bits (1751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/525 (63%), Positives = 398/525 (75%), Gaps = 3/525 (0%)

Query: 1   MTDLLTRRLQQLSQPQHLALLGQGLRGVERETLRVDRQGQLAQTPHPAALGSALTNELIT 60
           M++L TRRL  L+   H  LL QG RG+ERETLRVD QG+LA  PHP ALGSALTN  IT
Sbjct: 1   MSNLFTRRLALLADDAHRDLLNQGRRGIERETLRVDLQGKLALGPHPVALGSALTNPQIT 60

Query: 61  TDYSEALLEFITPAMPDIADALQRLDEIHRFAYPRLAGEFLWNASMPCVLPEEEQIPLAW 120
           TDYSE+LLEFITPA  D+A AL+ LD IHRFA  +L  E LW+ SMPC LPEE  IP+AW
Sbjct: 61  TDYSESLLEFITPAEHDVATALEELDRIHRFANAKLDHELLWSQSMPCTLPEEADIPIAW 120

Query: 121 YGNSHIGMLKHVYRRGLALRYGRTMQCIAGIHYNFSLSEDLWEVLRDEDDTVDPSLSRRD 180
           YG SHIGM+KHVYRRGLALRYG+ MQCIAG+HYN+SLSEDLW V++  + +    L  + 
Sbjct: 121 YGTSHIGMIKHVYRRGLALRYGKAMQCIAGLHYNYSLSEDLWRVIKQSEQS---RLDDKS 177

Query: 181 YQSERYIALIRNFRRYSWLLMYLFGASPAVATNFLRGRPHQLETLSEDTLYLPYGTSLRM 240
           YQSE YI+LIRNF+RYSWLLMYLFGASPA++T+FLRGR H+L+TLS+DTLYLPY TSLRM
Sbjct: 178 YQSESYISLIRNFQRYSWLLMYLFGASPALSTHFLRGREHELQTLSDDTLYLPYATSLRM 237

Query: 241 SDLGYQNHAQANITPHYNNLPAYIRSLSHAVSQPYPPYEAIGTKRDGQWVQINTNILQIE 300
           SDLGYQN+AQA + P YN+L +Y+RSLS AV Q YP YEAIGT+R+G+W+Q+NTN+LQIE
Sbjct: 238 SDLGYQNNAQAGLMPPYNDLESYMRSLSRAVRQAYPAYEAIGTRRNGEWIQLNTNLLQIE 297

Query: 301 NEFYSSIRPKRVINSGERPVQALSARGVQYVEVRCMDIDPFNPLGIGLEAARFLDVFLHF 360
           NE+Y++IRPKRVINSGERPV+AL ARGVQY+EVRCMDIDPF PLGI L  +RFLD FL F
Sbjct: 298 NEYYATIRPKRVINSGERPVEALCARGVQYIEVRCMDIDPFEPLGISLPTSRFLDAFLLF 357

Query: 361 LALEASCLTSDEEGAENRANFLATVKEGRRPGLQLHCKGESIVLTDWGNQLLDRMAPVAE 420
            AL+ S LT +    E   NF  TVKEGRRPGL L   G ++ L DWG +LL+R+   A+
Sbjct: 358 CALDDSPLTDEANNRERTENFARTVKEGRRPGLLLQRDGAAVKLQDWGLELLERIQATAD 417

Query: 421 LLDRHLGGSQHRDSLAVQRGKLADPDTTPSARVLREIRAAGNSFPGYTLANSQRQAEELL 480
           LLD     SQH  +LA Q+ KL D   TPSARVL E++A   SF  + L  S   AE   
Sbjct: 418 LLDAQRADSQHAQALAAQKEKLLDAGLTPSARVLAELQATDKSFEQFGLRQSIAHAEYFR 477

Query: 481 ARPLAAERSAEFDAIAQASLAAQRDIERTQEGDFDTFVAAYRAST 525
           ARPL AE +  F+ +A+ S+A Q ++ERTQ GDFD FV AY   T
Sbjct: 478 ARPLNAEENFYFETLAKTSIAEQEEMERTQSGDFDAFVEAYNQRT 522


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.320    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,199,382
Number of extensions: 48424
Number of successful extensions: 123
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 1,221,021
Length adjustment: 88
Effective length of query: 443
Effective length of database: 895,685
Effective search space: 396788455
Effective search space used: 396788455
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 132 (55.5 bits)