BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1258.p
         (317 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981654|ref|YP_001355206.1| ribonuclease BN [Janthinobacter...   363   e-102

>gi|152981654|ref|YP_001355206.1| ribonuclease BN [Janthinobacterium
           sp. Marseille]
          Length = 301

 Score =  363 bits (931), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/297 (58%), Positives = 225/297 (75%)

Query: 6   TRAQQAWQMTVAAIDAWITDFAPSMGAAIAYYTIFSIAPMLVIAIAVAGMLFGHDAAQGE 65
           T  Q AW +T  A+ AW+ DFAPSMGAA+AYYTIFS+APML+I IA+AG  FG + AQGE
Sbjct: 4   THLQDAWSLTKEAVQAWMQDFAPSMGAALAYYTIFSLAPMLIIVIAIAGFFFGQNTAQGE 63

Query: 66  IVNQIRDIVGTEGAFAIQGLLRSVSQPREGMIAAGISVVTLVIGATAVFSELQSALDRIW 125
           I+ Q+R +VG  GA A++G+LRSVSQP +G++AA +  +TL+IGATAVF ELQSAL+RIW
Sbjct: 64  IIAQLRGLVGDTGAAAVEGILRSVSQPGQGIVAATLGTLTLMIGATAVFGELQSALNRIW 123

Query: 126 RIPVVKRKSGVWQLARTRLLSFGLILGLGFLLIISLVVSAALAALGRWWGGWFEGWQLVL 185
           ++       GVW+   TRLLSFG+++GLGF+L+IS+++SAALAALG+WWG     W +VL
Sbjct: 124 KVTANNNTGGVWKFVCTRLLSFGMVMGLGFMLLISMILSAALAALGKWWGSMLGDWTIVL 183

Query: 186 QLLNFVLSFVVFSTLFSMIYKFMPRVTLSWHDVWIGAVATTVLFIIGKYLIGLYLGSTGM 245
           ++LN  +SF V +TLF+MIYKFMPR T++W +VW GAV T +LF +GK+LIGLYLG T M
Sbjct: 184 EILNLAVSFGVITTLFAMIYKFMPRATIAWRNVWFGAVITALLFTVGKFLIGLYLGKTNM 243

Query: 246 TSGFGAAGSFALLLLWIYYSAQIFLLGAEFTWIYANNFGSRARRQKLVNTVQEHHVS 302
            SGFGAAGS  +LL WIYYSAQIFLLGAEFTW+ +    +R       +   +  VS
Sbjct: 244 ASGFGAAGSLVVLLAWIYYSAQIFLLGAEFTWVLSQRHEARLAAANTSDAASDALVS 300


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.328    0.139    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 558,236
Number of extensions: 18167
Number of successful extensions: 111
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 234
Effective length of database: 914,170
Effective search space: 213915780
Effective search space used: 213915780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 129 (54.3 bits)