BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1248.p
         (118 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981909|ref|YP_001352540.1| pterin-4-alpha-carbinolamine de...   151   1e-38

>gi|152981909|ref|YP_001352540.1| pterin-4-alpha-carbinolamine
           dehydratase [Janthinobacterium sp. Marseille]
          Length = 120

 Score =  151 bits (382), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 86/111 (77%)

Query: 4   TASTLAAARCIQPIEALDDAAIASHLAALPDWKIDDGKLARTFAFSNYYQTLAFVNAMAW 63
           +A+ L   RC   + A     +A+ L ALP+WK+ DGK+ R ++F NYY TLAFVNA+A+
Sbjct: 3   SAAELRLQRCQPQVLASSADEVAAGLQALPEWKLQDGKIVREYSFQNYYLTLAFVNAIAY 62

Query: 64  IIHAEDHHPELVVTYNRCQVKFDTHSVNAGRGGLSANDFICAAKVDALFAQ 114
            IH EDHHPELV+TY +C VK+DTHSVNAG+GGLS NDFICAAK+DA++AQ
Sbjct: 63  TIHTEDHHPELVITYKQCLVKYDTHSVNAGKGGLSQNDFICAAKLDAIYAQ 113


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.131    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 270,594
Number of extensions: 9456
Number of successful extensions: 35
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 1,221,021
Length adjustment: 72
Effective length of query: 46
Effective length of database: 954,837
Effective search space: 43922502
Effective search space used: 43922502
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 123 (52.0 bits)