BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1238.p
         (268 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980407|ref|YP_001352526.1| nitrilase [Janthinobacterium sp...   420   e-119

>gi|152980407|ref|YP_001352526.1| nitrilase [Janthinobacterium sp.
           Marseille]
          Length = 269

 Score =  420 bits (1079), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 191/263 (72%), Positives = 228/263 (86%)

Query: 6   KVAALQMVSTPEVEQNFDAAARLVAQAAQQGAQLVLLPEYWPIMGRHERDKLAHAEADGS 65
           +VAA+QMVSTP +E+N   A RL+A+AAQQGAQLVLLPEYW  MG  E DKL +AE    
Sbjct: 7   RVAAIQMVSTPSIEENIATAKRLIAEAAQQGAQLVLLPEYWAAMGMQETDKLGYAEQVDI 66

Query: 66  GPIQQHMSALARQHRLWLVGGTLPLQSAVSDKVLNTSLVYGPDGQRVARYDKIHLFNFVR 125
           GPIQ  M+A AR+H++WL+GGTLPL + V+DKVLNT +VY P G+RV RYDKIHLF+F +
Sbjct: 67  GPIQSFMAATAREHQIWLIGGTLPLAADVADKVLNTMMVYNPAGERVKRYDKIHLFSFTK 126

Query: 126 GEENYDEARTIEYGSEVRSFEAPFGRVGLSVCYDLRFPELYRAMGECALIVMPAAFTYTT 185
           GEE+YDEARTI +G+EV +F+APFG+VGLSVCYDLRFPELYRAMG+C LIV+PAAFTYTT
Sbjct: 127 GEESYDEARTIVHGNEVTTFDAPFGKVGLSVCYDLRFPELYRAMGDCTLIVVPAAFTYTT 186

Query: 186 GRAHWELLLRARAIENQCYVLASAQGGQHVNGRRTWGHSMLVDPWGEIVSVLPEGEGLVI 245
           G+AHWE+LLRARAIENQCYVLA+AQGG+H NGR TWGHSML+DPWGE+ +VL EGEGLVI
Sbjct: 187 GKAHWEILLRARAIENQCYVLAAAQGGRHKNGRTTWGHSMLIDPWGEVKTVLAEGEGLVI 246

Query: 246 GDIDPHRLQYVRESLPALRHRKL 268
           GDI+PH L  +RE+LPAL+HRKL
Sbjct: 247 GDIEPHHLSGIRENLPALKHRKL 269


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 618,222
Number of extensions: 24657
Number of successful extensions: 51
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 51
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 1,221,021
Length adjustment: 82
Effective length of query: 186
Effective length of database: 917,867
Effective search space: 170723262
Effective search space used: 170723262
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 129 (54.3 bits)