BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1237.p (1435 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982123|ref|YP_001352525.1| hypothetical protein mma_0835 [... 1254 0.0 >gi|152982123|ref|YP_001352525.1| hypothetical protein mma_0835 [Janthinobacterium sp. Marseille] Length = 1349 Score = 1254 bits (3244), Expect = 0.0, Method: Compositional matrix adjust. Identities = 632/1339 (47%), Positives = 889/1339 (66%), Gaps = 16/1339 (1%) Query: 46 VAYFVFCALFLVLRYAVLPEIGHYKPQIERLVSRQIGRAVSIDDIAASWRGLRPQLSLTN 105 +AYF+FC LFL LRY VLP+I +Y+ +E + ++ IGR V+I I ASW GLRP LSL N Sbjct: 1 MAYFIFCVLFLGLRYVVLPQISNYRVDVENVATKAIGRPVTIGSIDASWHGLRPFLSLDN 60 Query: 106 LTVHDQQGEPALRLPRISTTLSWSSLLVAGLRVENLSIEGADLAIRRDAAGKLYVAG--I 163 + ++D+ G+ ALRLP++S T+SW S++VA LR+ +L I+ D+ + RDA G YVAG I Sbjct: 61 VAIYDKGGDVALRLPKVSATVSWWSVMVADLRLHSLEIDKPDMDVERDANGNFYVAGMLI 120 Query: 164 PVPAGGDGSSLDWLLSQREIVIRHSKLRWDDELRAAPELVLQDVNLVLHNRWLRHRLSLR 223 + GDG + +W+LSQREI I+ +LRW D+ R APEL+L DVN+VLHN H+ +L+ Sbjct: 121 DMQKDGDGKAANWILSQREIRIKDGQLRWQDKSRQAPELLLNDVNVVLHNEGRHHQFALK 180 Query: 224 AIPPQDMAAPLDVRADFSHPAFARS-SDISRWKGLLYADLRNTELAVWRAWIDYPIDIRS 282 A PP +AAPLDVRA F HP F++ SD +RW G +Y +R+TELA W+ +ID+P +++ Sbjct: 181 ATPPAAIAAPLDVRAAFDHPYFSKKISDATRWTGTIYTAVRDTELAAWKTYIDFPFELQQ 240 Query: 283 GRGSVRAWLTLDHAKVANFTADLRLTDFNARLSRQLDPLSLKRVNGRISASETLGPNLED 342 +GS+RAWL+ DHA++A+ TADL L+D +A+L + L PL L NGRI+ SE L + D Sbjct: 241 AKGSLRAWLSFDHARIADLTADLALSDVSAQLRKDLVPLELTSANGRIAISEPLDTSPRD 300 Query: 343 GIPTFGTNGHQVTLTDFSIETPDGFVLPPTSIAESYEPATPLKAERTSVKATYLNLLTLS 402 G PTFG G+ ++L +FS+ T DG VLP T++++ Y A E + L+L + Sbjct: 301 GKPTFGAQGYTISLMNFSLLTRDGLVLPSTTLSKRYVAAKKDVPEHAEILVKQLDLQAWA 360 Query: 403 QLATRLPLAPSHRKLLDDLAPRGELRDFTVQWQGSYPELSSYRVNGRFQNLGLKGLPAHV 462 A RLPL +++ D APRG L+DF+ QW G+YPE++SY++ G F NL + PA Sbjct: 361 NFAGRLPLPEEQLRMISDFAPRGVLKDFSAQWAGAYPEIASYKIKGDFANLSMNAQPARS 420 Query: 463 EPHRNGVRPARAQWAAFPGFSNLSGEVDATEKGGSVKVDARQLAVQLPAELFSEPTMPFD 522 PA+A A PGF NLSG +DA +GG++ + + QL + LP FSEP + FD Sbjct: 421 ARAATATAPAQAAIPAIPGFENLSGRIDANSQGGNIVLASDQLKLALPT-YFSEPEVAFD 479 Query: 523 TLKLQARWQFLKDQMLQVDLDQMQFTQPGVAGSLHGQHLVPLE---GRSMGSVDVSGELS 579 T + A+W F K+ + + + F Q G+ SL G HL+PL G +G++DV+G +S Sbjct: 480 TFNMDAQWAFQKNDQFLLSVKGLNFVQQGLTASLSGTHLMPLHKKAGHDLGTIDVTGNIS 539 Query: 580 SFDVKAVRRYLPPHLSEPLRHWLTEGLMAGTLKDVQFKLKGALADFPFHTAKPGDKPRGQ 639 ++ + YLP ++ R WL+ L+AGTL+D + KLKG LA FPFHT KP +KP+G+ Sbjct: 540 GLELNKIGNYLPTAMNADFRTWLSHALIAGTLRDARIKLKGDLAHFPFHTTKPNEKPKGE 599 Query: 640 FQLTGEFEGLKLNYTPGHLGRDGRDPEWPLLEEGRGRLSMDRTRLEIKADSARTLGARLG 699 F G + LNY P +DG+ P WPLLE+ +G + DRTR+EIK +S +T GA + Sbjct: 600 FTFGGRIDDGGLNYAPDMFAKDGKKPMWPLLEKVKGTILFDRTRMEIKGESGKTNGADVS 659 Query: 700 PVTARVADVDSHDAVLEIDGQATGPMPAFLQYVNQSPVARWTGNVMEHTTASGEARLDLK 759 V A + D+ + + VLEIDG A G + +QY SPVA W + + T ASG A L LK Sbjct: 660 NVKAVIPDLLADNPVLEIDGNAAGTLQTLVQYTLDSPVAEWIDHFTDETKASGNATLGLK 719 Query: 760 FQMPLHHAIETRAQGTFQFANNDVDLLPELPPLYRTSGKVEFNEHGFTLNGVRGQFLGDT 819 Q+PLH I+ + QG +F NN+V L +P + T+G++EFNE G TLNG++ FLG Sbjct: 720 LQLPLHKMIDAKVQGILKFNNNNVTLQNVIPMMSGTTGQLEFNEKGLTLNGIKSTFLGGP 779 Query: 820 LAISGGTQKDGSSQVRLEGAINIDNLRKQYPEPSLQRLLARFSGGTRYTATVQVRQHQPE 879 L ++GGTQKDG+ ++ +G + LRK YP P++Q+L+ + +G TR+ T+ VR + + Sbjct: 780 LTVTGGTQKDGNILIKGDGTLTAAGLRKNYPSPAMQKLVDKINGSTRFGVTIGVRSKRVD 839 Query: 880 VSIDSNLVGLGVDLPLPLRKGMQDSLPMRFDLLPLASADPLIEREEMRLALGANIAARYV 939 V +DSNL GLG+D P PL K +D+LP++F+ L LA + R+ +++ALG I A Y Sbjct: 840 VVVDSNLRGLGLDFPAPLNKAAKDALPLKFEQLSLAPDATGLMRDNLKVALGPAIVANYA 899 Query: 940 RERVAGKGN-DWRVASGGIGWNQPAPTPASGLKLALASDSLDVDAWLALKTALTGKEAGA 998 RE+ N +WRV GGIG N PAP P SGL L ++ SL+VD WL + + Sbjct: 900 REKNTSVANPEWRVVYGGIGVNTPAPVPTSGLALNISMRSLNVDDWLKVMSTDAVDPKKK 959 Query: 999 GGTSPSRLGSSDVTQYLEPDSISARVGELTLMGKQLNKLVLEAAHRRNAWQINLESQQAS 1058 P L + +++QY+EP SI+ R EL L+ K+ + +VL A H + AWQ N+++ Q S Sbjct: 960 VAADP--LSALNMSQYVEPTSIAVRATELNLLDKKFDNVVLGATHDKGAWQANVDAAQMS 1017 Query: 1059 GSVTWEDSGSGRGPGKVTARLSTLIIPKSNPATDATQPTPASAVKADDNVQMPALDIRAE 1118 G +TW +S SGRG GKVTARLS+L +PK+ A D +MPALD+ A+ Sbjct: 1018 GYLTWIESSSGRGLGKVTARLSSLTVPKT-----ANTEVKNLLDGVDTATEMPALDVIAD 1072 Query: 1119 QFELGGKKLGRLELDASNIVTSVGREWRISRLLLANPDAQFRAAGNWLSFGSNHTSNFTY 1178 FEL GKKLGRLEL A + + GREWRI L L+NPDA +A+G+WL+ S ++S+ Y Sbjct: 1073 NFELMGKKLGRLELLAHYVRATEGREWRIRNLSLSNPDASLKASGSWLAKKSGNSSSLDY 1132 Query: 1179 ALDIEDAGKLLERFGYPGTIRGGHGKLDGDLSWKAPPYAMDMASLAGQVHMDVHSGQFLK 1238 +++I +AG LL RFG+ +R G GK++G +SWK P+++D SL+G +++D+ SGQFLK Sbjct: 1133 SMNINNAGNLLGRFGFADVVRSGKGKMEGTISWKGLPFSIDYPSLSGNINLDMASGQFLK 1192 Query: 1239 VDPGAAKLLGVLNLQALPRRLTLDFRDVFSQGFAFDTVAGTASIAKGIASTDNLKMTGVT 1298 V+PGAAKLLGVL+LQ++PRRLTLDFRDVFS+GFAFD + G+A+I G+AST+NLKM GV+ Sbjct: 1193 VEPGAAKLLGVLSLQSIPRRLTLDFRDVFSEGFAFDGITGSANINNGVASTNNLKMRGVS 1252 Query: 1299 ASVLMSGSADIARETQDLHVVVIPEINLGTASVV-AMAVNPVVGVSTLLAQLFLRNPVMK 1357 A+VL+ GSADI +E+Q+L VVIPEIN G ASV A+AVNPV+G T LAQLFLR P+M+ Sbjct: 1253 ATVLIDGSADIDKESQNLRAVVIPEINAGAASVAYALAVNPVIGAGTFLAQLFLREPLMR 1312 Query: 1358 SLSFEYKVTGPWSDPIVVK 1376 + +FEY +TGPW DP V K Sbjct: 1313 AFTFEYMITGPWKDPNVTK 1331 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 3,444,321 Number of extensions: 150108 Number of successful extensions: 412 Number of sequences better than 1.0e-08: 1 Number of HSP's gapped: 403 Number of HSP's successfully gapped: 1 Length of query: 1435 Length of database: 1,221,021 Length adjustment: 95 Effective length of query: 1340 Effective length of database: 869,806 Effective search space: 1165540040 Effective search space used: 1165540040 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 136 (57.0 bits)