BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1219.p
         (125 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982273|ref|YP_001355158.1| hypothetical protein mma_3468 [...   135   8e-34
gi|152982628|ref|YP_001352461.1| hypothetical protein mma_0771 [...   106   6e-25

>gi|152982273|ref|YP_001355158.1| hypothetical protein mma_3468
           [Janthinobacterium sp. Marseille]
          Length = 127

 Score =  135 bits (340), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 66/123 (53%), Positives = 82/123 (66%)

Query: 3   QVNLPHIVAEVEQAFADYEYALLINDIPALDRWFWYAPETVRYGVGEVLLGGQAIRQYRK 62
           ++NLP +VAEV  AF  YE AL  ND+  LD  FW  P T+RYG GE L+G +AI+ +R 
Sbjct: 4   EINLPDVVAEVTAAFQRYEAALTGNDVAVLDELFWNNPRTLRYGAGENLVGYEAIKAFRL 63

Query: 63  TCTPVPASRKLQRTVVTTFGSDYATVSTEFTDHTSERIGRQMQTWVRMDQGWRIVAAHVS 122
                   R L  TV+TT+G DYAT +TEFT     RIGRQ  TW+R+ +GWRIVAAHVS
Sbjct: 64  ARPSKGLERDLVNTVITTYGRDYATANTEFTRQGETRIGRQSHTWLRLPEGWRIVAAHVS 123

Query: 123 LMA 125
           L+A
Sbjct: 124 LIA 126


>gi|152982628|ref|YP_001352461.1| hypothetical protein mma_0771
           [Janthinobacterium sp. Marseille]
          Length = 126

 Score =  106 bits (264), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 70/123 (56%)

Query: 2   MQVNLPHIVAEVEQAFADYEYALLINDIPALDRWFWYAPETVRYGVGEVLLGGQAIRQYR 61
           M +N P  + EVEQ F  YE AL+ ND+  LD  FW    T+RYG  E L+G + IR +R
Sbjct: 1   MNINQPLTLQEVEQVFDAYEKALVGNDVVKLDELFWNDAATLRYGATENLVGYEEIRAFR 60

Query: 62  KTCTPVPASRKLQRTVVTTFGSDYATVSTEFTDHTSERIGRQMQTWVRMDQGWRIVAAHV 121
                   +R +    +TTFG ++A  +  FT     RIGRQ QTWV+   GW +VAAHV
Sbjct: 61  LQRPSANLARIVTSRHITTFGDNFAVANITFTKEGVARIGRQTQTWVKFPDGWHVVAAHV 120

Query: 122 SLM 124
           S M
Sbjct: 121 SWM 123


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.323    0.134    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 294,445
Number of extensions: 10547
Number of successful extensions: 36
Number of sequences better than 1.0e-08: 2
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 2
Length of query: 125
Length of database: 1,221,021
Length adjustment: 73
Effective length of query: 52
Effective length of database: 951,140
Effective search space: 49459280
Effective search space used: 49459280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 124 (52.4 bits)