BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1217.p
         (325 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981109|ref|YP_001352519.1| bifunctional riboflavin kinase/...   503   e-144

>gi|152981109|ref|YP_001352519.1| bifunctional riboflavin kinase/FMN
           adenylyltransferase [Janthinobacterium sp. Marseille]
          Length = 326

 Score =  503 bits (1295), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 237/326 (72%), Positives = 278/326 (85%), Gaps = 1/326 (0%)

Query: 1   MKVFRGLPTAESRAPCALTIGNFDGVHLGHQALLARVREAAGTLGLDAAVMTFEPHPREF 60
           MKVFRGLP A SRAPCAL IGNFDGVH GHQALLAR+RE A  +GL++AVMTFEPHPREF
Sbjct: 1   MKVFRGLPNAASRAPCALAIGNFDGVHRGHQALLARLREVASKMGLESAVMTFEPHPREF 60

Query: 61  FAQLAGTPERAPARIANLRDKLEALANSGIDRVVVEHFGSHFAALSPQDFIEKILVQGLH 120
           FA  AG P +AP RIA+LRDKL++LA +G+DRV+VEHF +HFA+LSPQ+F+EKILVQGLH
Sbjct: 61  FAARAGDPSKAPTRIASLRDKLQSLAKAGVDRVIVEHFNAHFASLSPQEFVEKILVQGLH 120

Query: 121 VRWLMVGDDFCFGARRAGTLATLVEAGQHYGFAVHALPTVTNA-GVRISSSAVREALAAA 179
           V+WL+VGDDFC+GA+RAG +ATL+EAG+ YGF V + PTVT++ G RISSSAVREAL   
Sbjct: 121 VKWLIVGDDFCYGAKRAGNVATLIEAGKQYGFHVESQPTVTSSTGTRISSSAVREALLHG 180

Query: 180 DFELSRQLLGHPYVISGRVVHGKKLGRTIGFPTLNMRVGHKRPALSGIFVVQVHGLADHP 239
           DF  + +LLGHPY +SG V+HGKKLGRTIGFPTLN+RV HK PALSGI++VQVHGL + P
Sbjct: 181 DFARAEELLGHPYAMSGHVIHGKKLGRTIGFPTLNVRVAHKHPALSGIYIVQVHGLDEQP 240

Query: 240 LPAVASLGVRPTVDDSGRVLLETHLLDFQGDCYGKLVRVEFLKKLRDEEKYVDLPTLTTA 299
           LP VAS+GVRPTVDDSGRVLLETHL D+   CYG+L+RVEFLKKLRDEEKY+DLPTLT A
Sbjct: 241 LPGVASIGVRPTVDDSGRVLLETHLFDYSQQCYGRLIRVEFLKKLRDEEKYIDLPTLTAA 300

Query: 300 IARDVDHARAWFRENAGFAVSATDRI 325
           I RD   ARA+F++    A SATDRI
Sbjct: 301 INRDAIEARAYFKQLTDAATSATDRI 326


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.324    0.139    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 784,112
Number of extensions: 33457
Number of successful extensions: 131
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 130
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 1,221,021
Length adjustment: 83
Effective length of query: 242
Effective length of database: 914,170
Effective search space: 221229140
Effective search space used: 221229140
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 129 (54.3 bits)