BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1206.p
         (153 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981698|ref|YP_001354208.1| hypothetical protein mma_2518 [...   202   1e-53

>gi|152981698|ref|YP_001354208.1| hypothetical protein mma_2518
           [Janthinobacterium sp. Marseille]
          Length = 151

 Score =  202 bits (513), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 92/148 (62%), Positives = 112/148 (75%)

Query: 6   LSRFFMTSAAALLAAGCLCSASAQTPQVRKFPTTQLNIGIHLIKAEVAQTEAEREQGLMF 65
           +++F  T  A +  A  L + S+   Q +KFP   L  G+++IKAEV   EAER+QGLMF
Sbjct: 1   MNKFLSTCVATIALASTLSAGSSYAQQDKKFPVISLTAGMNIIKAEVVANEAERQQGLMF 60

Query: 66  REKMGDNEGMLFLFGQPAGVCMWMKNTLIPLSVAFMDEKGFIINIEEMKEQTLDSHCAKR 125
           R  MG NEGM+FLFG PAGVCMWMKNTLIPLSVAF+D  G I+NIE+MK Q+LDSHC+KR
Sbjct: 61  RPSMGQNEGMVFLFGAPAGVCMWMKNTLIPLSVAFIDADGKIVNIEDMKPQSLDSHCSKR 120

Query: 126 AAVYALEMNKGWFKQKNIKPGSKVEGLP 153
              YALEMN+GWFK KN+KPGS +EGLP
Sbjct: 121 PVPYALEMNEGWFKHKNLKPGSIIEGLP 148


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.321    0.132    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 291,663
Number of extensions: 10193
Number of successful extensions: 22
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 1,221,021
Length adjustment: 76
Effective length of query: 77
Effective length of database: 940,049
Effective search space: 72383773
Effective search space used: 72383773
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)