BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1157.p
         (258 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152981597|ref|YP_001351730.1| aldolase II superfamily protein...   166   2e-42

>gi|152981597|ref|YP_001351730.1| aldolase II superfamily protein
           [Janthinobacterium sp. Marseille]
          Length = 252

 Score =  166 bits (419), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 136/242 (56%), Gaps = 6/242 (2%)

Query: 11  DQPAHCSDQEWALRIQLAHCYRLVDYLGWTEMIFNHISVRVPGPEHHYLVNPFALNYNEV 70
           + PA  S  EW +RI LA CY L     W ++I+ HIS  VPG E  +L+NPF   ++E+
Sbjct: 6   NPPAGISAAEWQVRIDLAACYHLCALKNWDDLIYTHISATVPGEEGRFLINPFGFRFDEI 65

Query: 71  TPANLLKVGLDGQLAEASDYKANPAGFALHSAIHGARDDLRCVIHTHTTPISAVTMKKSG 130
           T +NL+K+ L G +     Y+ N  GFA+H A+H AR D  CV+H H     AV M++ G
Sbjct: 66  TASNLVKIDLQGNIIGDQTYRVNVTGFAIHGAVHAARPDAMCVMHLHNENGVAVGMQQGG 125

Query: 131 FEHNDFYGAQLFGRIGYHEFEGITLFAEEKQRMLQSLGDKHILVLRNHGVAVCESDIERA 190
                 +  + + +IGYH++EG+ L   E+ R+++ LGD   ++LRNHG  +    I  A
Sbjct: 126 LLPLSQHAMRFYRQIGYHDYEGLALSPVEQVRLIERLGDYPAMLLRNHGTLISGRTIAEA 185

Query: 191 FFLLWTVQRAAEIQVAGRAMGGEDQQLADGVRQKCADLTQQLIRNDGF--AVIFFEAIVR 248
           + L+ T+ +A   Q+  ++ GG    L     + CA   ++L+  DG    ++ + A++R
Sbjct: 186 YVLMDTLDKACSFQLKAQSGGGP---LNIPAPEICAKTYKELL-GDGSPEGILEWPALLR 241

Query: 249 KM 250
           K+
Sbjct: 242 KL 243


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.324    0.138    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 615,586
Number of extensions: 24833
Number of successful extensions: 77
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 77
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 1,221,021
Length adjustment: 81
Effective length of query: 177
Effective length of database: 921,564
Effective search space: 163116828
Effective search space used: 163116828
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 128 (53.9 bits)