BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1144.p
         (428 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152980174|ref|YP_001352018.1| dioxygenase (alpha subunit) oxi...    78   1e-15

>gi|152980174|ref|YP_001352018.1| dioxygenase (alpha subunit)
           oxidoreductase protein [Janthinobacterium sp. Marseille]
          Length = 417

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 41/294 (13%)

Query: 22  DAVVDPSLYTDPAIFEVEMDKIFYRTWIWVAHESEIKNPGDFKTAQIGRQPVIVVRDKSG 81
           +A +  ++Y D A+ + E+ ++F     +  HE  + N GDF T     +  ++VR + G
Sbjct: 65  NAQLPVNVYFDEALLKQEIQQLFRAGPRYAGHELMVPNVGDFATLAWENEGRMLVRSQQG 124

Query: 82  KINVLENRCRHRGATVCEKHKGNATGFTCPYHSWSYGLDGKLRGLPYPEGYEDVIEKADL 141
            I +L N CRHR A +    +G+A    CP H W+Y L G+L G P+  G    +  ++ 
Sbjct: 125 -IELLSNVCRHRQAKMFNG-RGHAKNIVCPLHRWTYDLKGELIGAPH-FGETPCLNLSNT 181

Query: 142 PLQSLRTESYHGMIFASFNQEIEPLSDFLGHAKKWIDLFMKQGAGFPIKVQGEHKFSFKG 201
           PLQ     S++G++F      +  +   LG  K  +D      +G+ +     H+  +  
Sbjct: 182 PLQ-----SWNGLLFEQNGVNVAKILGKLGVTKD-LDF-----SGYMLDHVEVHECDY-- 228

Query: 202 NWKIQLENTTDGYHFPVVHKTFLSSVDEETSEMLSFMTDDQSITRSLGNGHSVMIMVPEH 261
           NWK  +E   + YH    H    S V   + + L +   D+   +++G  H++       
Sbjct: 229 NWKTFIEVYLEDYHVEPFHPGLGSFV---SCDDLKWEFGDEYSVQTVGVHHAL------- 278

Query: 262 VDLDVDDGSEQLQERFAHVTEELSRTMPPEQVRRIVRSLHGAGFNLNLFPNVAM 315
                  GSE+ Q+    + +  +   PP          +GA + L L+PN+ +
Sbjct: 279 ----AKSGSEKYQKWQEQILQFRNGETPP----------YGAIW-LTLYPNIMV 317


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.319    0.136    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,111,670
Number of extensions: 48712
Number of successful extensions: 128
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 128
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 1,221,021
Length adjustment: 86
Effective length of query: 342
Effective length of database: 903,079
Effective search space: 308853018
Effective search space used: 308853018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 131 (55.1 bits)