BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1137.p
         (204 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982056|ref|YP_001355231.1| thiosulfate reductase cytochrom...   194   4e-51

>gi|152982056|ref|YP_001355231.1| thiosulfate reductase cytochrome B
           subunit (membrane anchoring protein) [Janthinobacterium
           sp. Marseille]
          Length = 196

 Score =  194 bits (492), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 100/192 (52%), Positives = 125/192 (65%), Gaps = 1/192 (0%)

Query: 5   PVRHPLAVRIAHWLNALAVACMISSGWGIYNASPIFSFKFAPWMTLGGWLGGSIAWHLAA 64
           P  HP  +R  HW+NA+AV  ++SSGW IYNASP F F F   +TLGGWLGG++ WH  A
Sbjct: 4   PTIHPAWLRATHWINAIAVLLLVSSGWRIYNASPFFDFSFPSDLTLGGWLGGALQWHFFA 63

Query: 65  MWLLVVNGLFYLLYGSVSGHFRRHLLPLHMSEVLQDARQALRFRLPH-QPGVYNAVQKLL 123
           MWLL +NG+FYL     SG   R   P+     LQD   AL+ +L H  P  YN VQK  
Sbjct: 64  MWLLFINGIFYLAINLFSGRMHRQFFPVSPRAFLQDMAAALKGKLAHADPRKYNTVQKAA 123

Query: 124 YWVVILLGILVVLSGLAIWKPVQLDGLAALLGGFDVARKVHFVAMAGIAGFVVVHLTLVA 183
           Y  VI   IL+VLSGL +WK VQ   L  LLGG++ AR+VHF AM+ +  FVVVHL +VA
Sbjct: 124 YLFVIADLILIVLSGLVLWKSVQFPLLRELLGGYEAARRVHFFAMSALVAFVVVHLVMVA 183

Query: 184 IVPKTLIPMLTG 195
           +VP+TL+ M+ G
Sbjct: 184 LVPRTLVAMIRG 195


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.329    0.143    0.471 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 450,701
Number of extensions: 16532
Number of successful extensions: 61
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 60
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 1,221,021
Length adjustment: 79
Effective length of query: 125
Effective length of database: 928,958
Effective search space: 116119750
Effective search space used: 116119750
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 127 (53.5 bits)