BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.1121.p (259 letters) Database: BlastDatabases/707/707 3697 sequences; 1,221,021 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|152982327|ref|YP_001353563.1| carboxyl esterase, a/b hydrolas... 72 5e-14 gi|152982226|ref|YP_001354032.1| hydrolase [Janthinobacterium sp... 59 4e-10 gi|152979962|ref|YP_001353174.1| hypothetical protein mma_1484 [... 54 1e-08 >gi|152982327|ref|YP_001353563.1| carboxyl esterase, a/b hydrolase [Janthinobacterium sp. Marseille] Length = 300 Score = 71.6 bits (174), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 69/146 (47%), Gaps = 25/146 (17%) Query: 1 MPFATLNGIKLHYQLDGDAALPVLVLSNSLGTSLAMWE-PQIAELS-QHFRVLRYDTRGH 58 M F NGI+L Y+ G V++L LGT + W P EL+ Q +RV+R+D R Sbjct: 1 MKFVKANGIELAYESFGAEQDEVILLIAGLGTQMIRWTTPFCEELAGQAYRVIRFDNRDA 60 Query: 59 G----------------QSEVTPG-----PYTIAQLGSDVIALLDQLEIAQAHFCGLSMG 97 G S + G PYT+ + D IALLD L I +AH G SMG Sbjct: 61 GCSTHFSASGTLDFKELASALMAGRRPDVPYTLYDMAGDAIALLDALAIERAHVVGRSMG 120 Query: 98 GSTFMWLAVHHPERVNKL--ILCNTG 121 G +A HP RV L I+ +TG Sbjct: 121 GMIAQIMASEHPARVLSLTSIMSSTG 146 >gi|152982226|ref|YP_001354032.1| hydrolase [Janthinobacterium sp. Marseille] Length = 292 Score = 58.5 bits (140), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 70/289 (24%), Positives = 108/289 (37%), Gaps = 39/289 (13%) Query: 4 ATLNGIKLHYQLDGDAALPVLVLSNSLGTSLAMWEPQIAELSQHFRVLRYDTRGHGQSEV 63 A +NG+ + Y G P L+L + + +W L+QH+ V+ D RG+G S+ Sbjct: 10 AKVNGVNIAYIKGGQG--PALLLLHGHPQTHVIWHKVADTLAQHYTVIASDLRGYGDSDK 67 Query: 64 TPG-----PYTIAQLGSDVIALLDQLEIAQAHFCGLSMGGSTFMWLAVHHPERVNKLILC 118 G Y+ +G D IAL+ QL Q GG +A+ HPE + KL++ Sbjct: 68 PQGLPDHSNYSKRVMGEDQIALMQQLGFEQFLLMAHDRGGRVAYRMALDHPEVIRKLVIL 127 Query: 119 NTGAKIGTAEAWNSRIDTVLRDGLPAIAPAVVSRWLTPEYAEHNPQQ-VQALTAMLLATP 177 + + E N T PA L + + Q + +A + Sbjct: 128 DVAPTLAMYEKANRAFATAYYHWFFLTRPAPFPETLINSHPDVYLQHTIAGRSAGMKPFT 187 Query: 178 AEGYAGACAAVRD--------NDLREAIAG---------------IRAPTLVIAGSGDLP 214 E YA +RD D R A AG I+AP L + G + Sbjct: 188 PEAYAEYLRCLRDPATIHGICEDYR-ASAGIDLEHERTDLAAGNKIQAPMLALWGKHGVI 246 Query: 215 T----PPADAQFMRATIPGALYVEFDAAHISNQQQPRAFTQAVRQFLTE 259 P A+ Q + A + G D H + +P+ V FL + Sbjct: 247 EQCFQPLAEWQHLAANVRGH---ALDCGHYIPEDEPQLLLDEVLPFLAD 292 >gi|152979962|ref|YP_001353174.1| hypothetical protein mma_1484 [Janthinobacterium sp. Marseille] Length = 288 Score = 53.9 bits (128), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 110/248 (44%), Gaps = 24/248 (9%) Query: 10 KLHYQLDGDAALP-VLVLSNSLGTSLAMWEPQIAELSQHFRVLRYDTRGHGQSE--VTPG 66 ++ Y+ GD++ P LV + L ++ AEL+ +RV+ D G G+S + P Sbjct: 19 QMSYKEWGDSSNPKTLVCVHGLSRVSDDFDMLAAELANDYRVICPDVVGRGRSGRLLDPQ 78 Query: 67 PYTIAQLGSDVIALLDQLEIAQAHFCGLSMGGSTFMWLAVHHPERVNKLILCNTGAKIGT 126 Y I Q SD++ L+ +L++ + H+ G S+GG M LA V KLIL + G ++ Sbjct: 79 YYQIPQYVSDMVTLIARLDVTELHWLGTSLGGVIGMALASLPGNPVRKLILNDIGPEMDA 138 Query: 127 AEAWNSRI-DTVLRDGLPAIAPAVVS--RWLTPEYAEHNPQQVQALTAMLLATPAEG--- 180 A +RI + V +D A + R ++ + H+ Q + L A ++ A+G Sbjct: 139 AAL--ARIGEYVGKDVRFATFDEAWNYVRAISLSFGPHSDPQWRKLAADVMHQDADGQWV 196 Query: 181 -----------YAGACAAVRDNDLR--EAIAGIRAPTLVIAGSGDLPTPPADAQFMRATI 227 A +V+ + R A IR PTLVI G+ Q M Sbjct: 197 FSYDAGIAVPFKATTVHSVQADTQRLWAAYDAIRCPTLVIRGAESDLLSNQTVQAMSQRG 256 Query: 228 PGALYVEF 235 P A VE Sbjct: 257 PKAQIVEL 264 Database: BlastDatabases/707/707 Posted date: Apr 13, 2011 12:58 PM Number of letters in database: 1,221,021 Number of sequences in database: 3697 Lambda K H 0.320 0.134 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 3697 Number of Hits to DB: 661,153 Number of extensions: 27400 Number of successful extensions: 87 Number of sequences better than 1.0e-08: 4 Number of HSP's gapped: 84 Number of HSP's successfully gapped: 4 Length of query: 259 Length of database: 1,221,021 Length adjustment: 81 Effective length of query: 178 Effective length of database: 921,564 Effective search space: 164038392 Effective search space used: 164038392 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 128 (53.9 bits)