BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.1118.p
         (807 letters)

Database: BlastDatabases/707/707 
           3697 sequences; 1,221,021 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|152982918|ref|YP_001352697.1| hypothetical protein mma_1007 [...  1140   0.0  

>gi|152982918|ref|YP_001352697.1| hypothetical protein mma_1007
           [Janthinobacterium sp. Marseille]
          Length = 936

 Score = 1140 bits (2948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/794 (71%), Positives = 654/794 (82%)

Query: 1   MFHLQSLELLQWDYCQRLTLPLDGSIITIAGPNGSGKTTLLDAMRTLLGLECSGGRSYKT 60
           MFHLQS+ELLQWDYCQRLTLPLDG+IIT+AGPNGSGKTTLLDAMRTLLGL+CSGGRSYKT
Sbjct: 1   MFHLQSIELLQWDYCQRLTLPLDGAIITVAGPNGSGKTTLLDAMRTLLGLDCSGGRSYKT 60

Query: 61  YARHANADTTWLRATVDNRPHGRQTSTRPFARNLLYADQVTLACRIERNGGDWQRRYCMS 120
           YARHAN+DTTWLR TVDNRPH RQTSTRPFARNLLY DQVTLACRIERNGGDWQRRY MS
Sbjct: 61  YARHANSDTTWLRTTVDNRPHSRQTSTRPFARNLLYGDQVTLACRIERNGGDWQRRYTMS 120

Query: 121 DGDVAIETLAQLPEKEWLGLDHWRKRLEGAGLSRAIARVLALEQGQTDRLCEFSPKELLR 180
           DGDV+IETLA  P+KEWLG++HWRKRLEGAGLSRAIARVLALEQGQTDRLCEFSPKELLR
Sbjct: 121 DGDVSIETLAATPDKEWLGVEHWRKRLEGAGLSRAIARVLALEQGQTDRLCEFSPKELLR 180

Query: 181 LVFEVFGDQEVLDRYEEARRHQRDLAAEVAQAEQELAYSEAQLAQLDSRVTLYRQYQGKL 240
           LVFEVFGDQEVLDRYEEARRHQR+L AEV  AE+EL + EAQL+ LD+RV LYRQYQ KL
Sbjct: 181 LVFEVFGDQEVLDRYEEARRHQRELTAEVEAAERELTHCEAQLSALDARVNLYRQYQIKL 240

Query: 241 REREMLATEVIPVLRWHEERQGTATRLRELHRQRLHHNSQRRQRSSDTLQLSALLTQQQA 300
            ERE+LATEVIPVL WHEERQ TATRLRELHRQRLH +SQR+QR+ D+ +L  L  + QA
Sbjct: 241 GERELLATEVIPVLSWHEERQATATRLRELHRQRLHASSQRQQRAEDSTRLLRLFEESQA 300

Query: 301 ARDKVAALERDKAEAQQAQQKARDAEKPVEELVKQADELLALSAVEGDATQLLARVDELE 360
           A +KV  L+  +  AQ AQ +ARDAE+P+E+LV+ ADELL+L+AVEGDA QL A V ELE
Sbjct: 301 ASNKVRELDTARTRAQAAQTQARDAERPIEDLVRHADELLSLAAVEGDAAQLSALVQELE 360

Query: 361 QQKSALHDRWRDLEQQRKDANGALERLTGQRQAPRPGDVQQFTRALRQAGIAHHLLADVI 420
           ++K  L D+WR+LE QR DA  A +RL GQR AP P DVQ+F R L Q  I HH LA+VI
Sbjct: 361 KKKVDLSDQWRNLESQRNDAQLAWDRLQGQRHAPPPNDVQKFERVLHQEKIGHHFLANVI 420

Query: 421 EIADDHWRAAAEGVLRASCWVVVLDDPKDEAAAMALAERERYRHYVVADAATATAQPPAE 480
           EI DD WRAAAEGVLR+S W+VVL+DP DEA AMA+AERERYRHYV+ DA  A   PPA+
Sbjct: 421 EITDDTWRAAAEGVLRSSRWIVVLNDPADEARAMAIAERERYRHYVLTDAVLAPTSPPAD 480

Query: 481 SLLAVLRFSAKAPSWLLRQLAQIRRVADTAEGASSGGEWITAQAYWRDGRGGRSVWRDPG 540
           SLLAVL FSAK PSWLL+QLAQIRRVADT EGA  GGEWIT +AY RDGRGGRSVW D G
Sbjct: 481 SLLAVLNFSAKIPSWLLKQLAQIRRVADTEEGAKRGGEWITPRAYLRDGRGGRSVWSDAG 540

Query: 541 DYQFGAAALASRQASIQKRLATLDEQLTDIVLKQSEVKRQLEAARKATEGHLAAEVLARR 600
           DYQFGAAAL SR+ASI+KRL  LD++LT++ L+ S VKRQL AA  AT+GH AAE LA R
Sbjct: 541 DYQFGAAALTSRKASIEKRLNALDKELTEVALEDSAVKRQLAAAVDATKGHRAAEELANR 600

Query: 601 SEEFDQARHQLPALRQARVAASERWFQLDAQYAEAIEQRTILDGRHDALQRRLRDSEGDL 660
           SEEF+  R QLPAL+QAR AASERW  LD +Y+ A+  +T     ++ LQ++LR+SEG++
Sbjct: 601 SEEFELGRRQLPALKQARAAASERWQNLDHEYSSALVIQTNSATTYERLQKQLRESEGEI 660

Query: 661 AGQERDWRIRHDEQRARALASRAQKSRFPQRWIATDALQALYDKYTNAKQAELRMASVES 720
             QER+WR R++EQR +A AS AQK +FP RWI T A+ AL   Y+N+KQAELRM SVE+
Sbjct: 661 ERQEREWRGRYEEQRTKATASSAQKRKFPSRWITTSAIAALNVTYSNSKQAELRMKSVET 720

Query: 721 ELETGQWEKDGTVEDKHLIMQGTVGNQRNELDSRKISNAQAEEAVGNARERYIDVLRATV 780
           +L++G WE D TV +K  +M GTV  QR++LDSRK SN+ A  AV NARERYIDVLRAT+
Sbjct: 721 DLQSGTWETDSTVLEKQALMGGTVSKQRSDLDSRKSSNSAAAVAVDNARERYIDVLRATI 780

Query: 781 RRYRKNIRRSGCLG 794
           RRYRKNI   G L 
Sbjct: 781 RRYRKNIVELGLLA 794


  Database: BlastDatabases/707/707
    Posted date:  Apr 13, 2011 12:58 PM
  Number of letters in database: 1,221,021
  Number of sequences in database:  3697
  
Lambda     K      H
   0.318    0.130    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3697
Number of Hits to DB: 1,669,515
Number of extensions: 65361
Number of successful extensions: 348
Number of sequences better than 1.0e-08: 1
Number of HSP's gapped: 347
Number of HSP's successfully gapped: 1
Length of query: 807
Length of database: 1,221,021
Length adjustment: 91
Effective length of query: 716
Effective length of database: 884,594
Effective search space: 633369304
Effective search space used: 633369304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 133 (55.8 bits)